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L3_060_043G1_scaffold_342

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_342_1
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(217..972)
DNA (756bp) protein (252aa)
Uncharacterized protein n=8 Tax=Enterobacteriaceae RepID=E1HPX0_ECOLX
Putative predicted metal-dependent hydrolase {ECO:0000313|EMBL:CCK07501.1}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 696.;"
putative metal-dependent hydrolase
L3_060_043G1_scaffold_342_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(969..4364)
DNA (3396bp) protein (1132aa)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5U0_9ENTR
Type I restriction enzyme {ECO:0000313|EMBL:AJE56348.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
DEAD/DEAH box helicase
L3_060_043G1_scaffold_342_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4324..6186)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3889-1 RepID=T9U4R2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AET17241.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
hypothetical protein
L3_060_043G1_scaffold_342_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6131..6814)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=I4SUA9_ECOLX
putative metal-binding protein
Uncharacterized protein {ECO:0000313|EMBL:KGM65385.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_060_043G1_scaffold_342_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6811..7986)
DNA (1176bp) protein (392aa)
Type I restriction enzyme, S subunit {ECO:0000313|EMBL:KGM65386.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KGM65386.1};; Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:KGM81350.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KGM81350.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5U3_9ENTR
restriction modification system DNA specificity subunit
L3_060_043G1_scaffold_342_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7976..9499)
DNA (1524bp) protein (508aa)
Type I restriction-modification system, M subunit n=1 Tax=Escherichia coli UMEA 3240-1 RepID=T9FZ92_ECOLX
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EQY61023.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
type I restriction-modification protein subunit M
L3_060_043G1_scaffold_342_7
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9872..11038
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Escherichia coli ECA-0157 RepID=V6Q1G1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CCK07506.1}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 696.;"
hypothetical protein
L3_060_043G1_scaffold_342_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11545..12675
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Escherichia coli O78:H11 (strain H10407 / ETEC) RepID=E3PAM5_ECOH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKF20909.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_060_043G1_scaffold_342_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12818..13954
DNA (1137bp) protein (379aa)
Phage integrase family protein n=1 Tax=Escherichia coli 2788150 RepID=M8ZEM1_ECOLX
Integrase {ECO:0000313|EMBL:KHI26500.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
phage integrase
L3_060_043G1_scaffold_342_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14097..14297
DNA (201bp) protein (67aa)
Excisionase family DNA binding domain-containing protein n=6 Tax=Escherichia coli RepID=L5DHF4_ECOLX
Strain O157 SvETEC scaffold4.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ47802.1}; Uncharacterized protein {ECO:0000313|EMBL:KHH06508.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_060_043G1_scaffold_342_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14287..14925
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=M9AJF6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ01462.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_060_043G1_scaffold_342_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14975..17575
DNA (2601bp) protein (867aa)
Putative dNA-directed DNA polymerase n=1 Tax=Escherichia coli 2788150 RepID=M8ZSA4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AJE56355.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative DNA-directed DNA polymerase
L3_060_043G1_scaffold_342_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17624..17950)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=M8ZWW7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHI26504.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_060_043G1_scaffold_342_14
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18340..18879
DNA (540bp) protein (180aa)
DeoR-like helix-turn-helix domain protein n=1 Tax=Escherichia coli 2788150 RepID=M8ZEM6_ECOLX
putative transcriptional regulator, HTH
COG2378: Predicted transcriptional regulator {ECO:0000313|EMBL:CCK07510.1}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 696.;"
Displaying 14 items

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