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L3_060_043G1_scaffold_379

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_379_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..349
DNA (348bp) protein (116aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Serine hydroxymethyltransferase n=6 Tax=Enterobacteriaceae RepID=I6GYR8_SHIFL
glyA; serine hydroxymethyltransferase
L3_060_043G1_scaffold_379_2
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(431..1633)
DNA (1203bp) protein (401aa)
3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component {ECO:0000313|EMBL:CEJ66889.1}; EC=1.18.1.3 {ECO:0000313|EMBL:CEJ66889.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GYR7_SHIFL
phenoxybenzoate dioxygenase
L3_060_043G1_scaffold_379_3
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1643..2455)
DNA (813bp) protein (271aa)
2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase {ECO:0000313|EMBL:CEJ66890.1}; EC=1.3.1.- {ECO:0000313|EMBL:CEJ66890.1};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase n=3 Tax=Enterobacteriaceae RepID=I6GYR6_SHIFL
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
L3_060_043G1_scaffold_379_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2452..2772)
DNA (321bp) protein (107aa)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit n=3 Tax=Citrobacter RepID=J0VWT6_9ENTR
3-phenylpropionate dioxygenase {ECO:0000313|EMBL:KKC64065.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hcaC; 3-phenylpropionate dioxygenase ferredoxin subunit
L3_060_043G1_scaffold_379_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2772..3290)
DNA (519bp) protein (173aa)
3-phenylpropionate dioxygenase, beta subunit {ECO:0000313|EMBL:CDL41222.1}; EC=1.14.12.19 {ECO:0000313|EMBL:CDL41222.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
3-phenylpropionate dioxygenase subunit beta n=3 Tax=Citrobacter RepID=J0MAX8_9ENTR
3-phenylpropionate dioxygenase
L3_060_043G1_scaffold_379_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3287..4648)
DNA (1362bp) protein (454aa)
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01648}; EC=1.14.12.19 {ECO:0000256|HAMAP-Rule:MF_01648};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QYP3_CITFR
3-phenylpropionate dioxygenase
L3_060_043G1_scaffold_379_7
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4784..5677
DNA (894bp) protein (298aa)
Hca operon transcriptional activator n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6L7_9ENTR
Hca operon transcriptional activator {ECO:0000313|EMBL:EFE09797.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
transcriptional regulator
L3_060_043G1_scaffold_379_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5664..6731)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SMP0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX62692.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_060_043G1_scaffold_379_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6743..9238)
DNA (2496bp) protein (832aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M818_9ENTR
Outer membrane protein {ECO:0000313|EMBL:ETX62691.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
P pilus assembly protein, porin PapC
L3_060_043G1_scaffold_379_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9292..9984)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SMN8_CITFR
Periplasmic pilin chaperone {ECO:0000313|EMBL:ETX62690.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
P pilus assembly protein, chaperone PapD
L3_060_043G1_scaffold_379_11
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10065..10637)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VCC6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EOQ48949.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
P pilus assembly protein, pilin FimA
L3_060_043G1_scaffold_379_12
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10956..11402
DNA (447bp) protein (149aa)
Aldose 1-epimerase family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GYQ8_SHIFL
Aldose 1-epimerase family protein {ECO:0000313|EMBL:EIQ73650.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
aldose epimerase
L3_060_043G1_scaffold_379_13
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11491..12639
DNA (1149bp) protein (383aa)
3-phenylpropionic acid MFS transporter n=1 Tax=Citrobacter freundii RepID=UPI0003105800
Probable 3-phenylpropionic acid transporter {ECO:0000313|EMBL:CEJ66899.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
3-phenylpropionic acid transporter
L3_060_043G1_scaffold_379_14
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12634..13911)
DNA (1278bp) protein (426aa)
PRD domain protein n=7 Tax=Enterobacteriaceae RepID=I6GYQ6_SHIFL
Stationary phase inducible protein CsiE {ECO:0000313|EMBL:CEJ66900.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
stationary phase inducible protein CsiE
L3_060_043G1_scaffold_379_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14738..15337)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R2G3_CITFR
Phosphosugar isomerase/binding protein {ECO:0000313|EMBL:CDL41209.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
phosphosugar isomerase
L3_060_043G1_scaffold_379_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15334..16971)
DNA (1638bp) protein (546aa)
Carbohydrate kinase n=3 Tax=Citrobacter RepID=M3DFS7_CITFR
Ribulokinase {ECO:0000313|EMBL:KJC07068.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ribulokinase
Displaying 16 items

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