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L3_060_043G1_scaffold_554

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_043G1_scaffold_554_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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44..1033
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1411646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS10.;"
DNA-directed RNA polymerase subunit alpha n=242 Tax=Bacteria RepID=RPOA_ENT38
DNA-directed RNA polymerase subunit alpha
L3_060_043G1_scaffold_554_2
Serratia symbiotica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1074..1463
DNA (390bp) protein (130aa)
50S ribosomal protein L17 n=15 Tax=Serratia RepID=RL17_SERP5
rplQ; 50S ribosomal subunit protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=138074 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia symbiotica.;"
L3_060_043G1_scaffold_554_3
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1612..1986
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Serratia marcescens RepID=UPI0002F100C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ56221.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L3_060_043G1_scaffold_554_4
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1986..2417
DNA (432bp) protein (144aa)
Zn(II)-responsive regulator n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A3Q0_SERMA
zntR; zinc-responsive transcriptional regulator
HTH-type transcriptional regulator zntR {ECO:0000313|EMBL:EZQ56220.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L3_060_043G1_scaffold_554_5
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2492..2698
DNA (207bp) protein (69aa)
Uncharacterized protein n=3 Tax=Serratia marcescens RepID=L7ZU45_SERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE20266.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L3_060_043G1_scaffold_554_6
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2757..3173)
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel n=2 Tax=Serratia marcescens RepID=L7ZRE4_SERMA
mscL; large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L3_060_043G1_scaffold_554_7
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3311..4687)
DNA (1377bp) protein (459aa)
NAD-binding component of TrK potassium transporter n=3 Tax=Serratia marcescens RepID=L7ZSX6_SERMA
trkA; NAD-binding component of TrK potassium transporter
NAD-binding component of TrK potassium transporter {ECO:0000313|EMBL:AGE20264.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L3_060_043G1_scaffold_554_8
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..6030)
DNA (1290bp) protein (430aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rRNA m5C967 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01856}; rRNA (cytosine-C(5)-)-methyltransferase RsmB {ECO:0000256|HAMAP-Rule:MF_01856}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
16S rRNA methyltransferase n=1 Tax=Serratia marcescens RepID=UPI000308C326
16S rRNA methyltransferase B
L3_060_043G1_scaffold_554_9
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6103..7047)
DNA (945bp) protein (315aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
methionyl-tRNA formyltransferase n=1 Tax=Serratia marcescens RepID=UPI0002F51295
L3_060_043G1_scaffold_554_10
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7065..7574)
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Peptide deformylase n=2 Tax=Serratia marcescens RepID=L7ZU41_SERMA
def; peptide deformylase
L3_060_043G1_scaffold_554_11
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7708..8829
DNA (1122bp) protein (374aa)
DNA protecting protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A419_SERMA
hypothetical protein
DNA protecting protein DprA {ECO:0000313|EMBL:EZQ56213.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L3_060_043G1_scaffold_554_12
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8801..9274
DNA (474bp) protein (158aa)
Protein Smg n=3 Tax=Serratia marcescens RepID=L7ZSX2_SERMA
hypothetical protein
Protein Smg {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L3_060_043G1_scaffold_554_13
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9300..9845
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=J9LWE1_ACYPI
putative DNA-binding protein
DNA topoisomerase {ECO:0000313|EMBL:EZQ56211.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L3_060_043G1_scaffold_554_14
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9853..10422
DNA (570bp) protein (190aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Threonylcarbamoyl-AMP synthase n=2 Tax=Serratia marcescens RepID=L7ZT58_SERMA
putative ribosome maturation factor
L3_060_043G1_scaffold_554_15
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10434..11252
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Serratia marcescens VGH107 RepID=M3C5P6_SERMA
L3_060_043G1_scaffold_554_16
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11291..11833)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Serratia marcescens RepID=L7ZRD8_SERMA
transferase
Protein YrdA {ECO:0000313|EMBL:EZQ56208.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Displaying 16 items

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