ggKbase home page

L3_060_052G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_052G1_scaffold_47_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

L3_060_052G1_scaffold_47_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80..1441
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ00_CLOPF
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
L3_060_052G1_scaffold_47_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1491..2462
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Clostridium perfringens RepID=MRAY_CLOP1
L3_060_052G1_scaffold_47_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2490..3614
DNA (1125bp) protein (375aa)
Stage V sporulation protein E n=8 Tax=Clostridium perfringens RepID=H7CXQ4_CLOPF
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3772..4518
DNA (747bp) protein (249aa)
Cell division protein FtsQ n=6 Tax=Clostridium perfringens RepID=H7CXQ3_CLOPF
cell division protein FtsQ
Cell division protein FtsQ {ECO:0000313|EMBL:EIA16708.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4532..5248
DNA (717bp) protein (239aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXQ2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5261..5599
DNA (339bp) protein (113aa)
Small basic protein n=10 Tax=Clostridium perfringens RepID=H7CXQ0_CLOPF
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT23339.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5612..6343
DNA (732bp) protein (244aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15079.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_052G1_scaffold_47_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6443..7102
DNA (660bp) protein (220aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_052G1_scaffold_47_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7121..7570
DNA (450bp) protein (150aa)
Cell division protein SepF n=10 Tax=Clostridium perfringens RepID=SEPF_CLOP1
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7572..8333
DNA (762bp) protein (254aa)
S4 domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CXP6_CLOPF
S4 domain-containing protein
S4 domain-containing protein {ECO:0000313|EMBL:EIA16701.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8346..8972
DNA (627bp) protein (209aa)
Cell-division initiation protein DivIVA n=8 Tax=Clostridium perfringens RepID=H7CXP5_CLOPF
cell division protein DivIVA
Cell-division initiation protein DivIVA {ECO:0000313|EMBL:EIA16700.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9110..10030
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Pseudouridine synthase n=6 Tax=Clostridium perfringens RepID=H7CXP4_CLOPF
hypothetical protein
L3_060_052G1_scaffold_47_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10034..10570
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=11 Tax=Clostridium perfringens RepID=PYRR_CLOP1
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10590..11717
DNA (1128bp) protein (376aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XJB3_CLOPE
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81554.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_052G1_scaffold_47_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11828..13555)
DNA (1728bp) protein (576aa)
Fibronectin-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8W3_CLOPF
Fibronectin-binding protein {ECO:0000313|EMBL:EDT23333.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
fibronectin-binding protein
L3_060_052G1_scaffold_47_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13647..14465
DNA (819bp) protein (273aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Diaminopimelate epimerase n=4 Tax=Clostridium perfringens RepID=H7CXP0_CLOPF
L3_060_052G1_scaffold_47_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14482..15513
DNA (1032bp) protein (344aa)
Putative lipoprotein n=2 Tax=Clostridium perfringens RepID=Q0TPB2_CLOP1
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT23275.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15612..17000
DNA (1389bp) protein (463aa)
Putative pilus biogenesis protein n=2 Tax=Clostridium perfringens RepID=Q0TPB3_CLOP1
pilus biogenesis protein
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT23281.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16987..18006
DNA (1020bp) protein (340aa)
Putative pilus biogenesis protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8W7_CLOPF
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT23295.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pilus biogenesis protein
L3_060_052G1_scaffold_47_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17999..18457
DNA (459bp) protein (153aa)
Putative type IV pilin n=2 Tax=Clostridium perfringens RepID=Q0TPB5_CLOP1
type IV pilin
Putative type IV pilin {ECO:0000313|EMBL:EDT23303.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18447..18959
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8W9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23271.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19124..19390
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8X0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23280.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19377..19787
DNA (411bp) protein (137aa)
Putative type IV pilin n=2 Tax=Clostridium perfringens RepID=Q0TPB8_CLOP1
type IV pilin
Putative type IV pilin {ECO:0000313|EMBL:ABG87363.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_060_052G1_scaffold_47_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19756..20373
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TPB9_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23317.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20333..20782
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CXN1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16686.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_052G1_scaffold_47_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20770..21117
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XJC4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81542.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_052G1_scaffold_47_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21288..21845
DNA (558bp) protein (186aa)
Elongation factor P n=10 Tax=Clostridium perfringens RepID=EFP_CLOP1
efp; elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_052G1_scaffold_47_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21959..22321
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8X6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT23304.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_052G1_scaffold_47_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22519..23403
DNA (885bp) protein (295aa)
Stage III sporulation protein AA n=6 Tax=Clostridium perfringens RepID=Q0TPC4_CLOP1
stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:EDT23325.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 168 in total

View Taxonomy