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L3_060_052G1_scaffold_389

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_052G1_scaffold_389_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

L3_060_052G1_scaffold_389_2
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(41..217)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XYL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57328.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_060_052G1_scaffold_389_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(201..1595)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YIM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57327.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_060_052G1_scaffold_389_4
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2287..2694
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77969.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Transposase domain (DUF772).
L3_060_052G1_scaffold_389_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(3335..4222)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RND9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44546.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_052G1_scaffold_389_6
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4236..5522)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EEX21182.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EEX21182.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Lachnospiraceae RepID=C9L936_BLAHA
L3_060_052G1_scaffold_389_7
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5548..6072)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NGA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11163.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_052G1_scaffold_389_8
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6092..7033)
DNA (942bp) protein (314aa)
ParB-like protein n=3 Tax=Lachnospiraceae RepID=C9L934_BLAHA
ParB-like protein {ECO:0000313|EMBL:EEX21180.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
ParB-like partition proteins
L3_060_052G1_scaffold_389_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(7030..7800)
DNA (771bp) protein (257aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGV1_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDC44564.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATPases involved in chromosome partitioning
L3_060_052G1_scaffold_389_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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8068..9021
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44566.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_052G1_scaffold_389_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9115..10620)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44569.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_052G1_scaffold_389_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(10622..12094)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SD99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44572.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type uncharacterized transport system.
L3_060_052G1_scaffold_389_13
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12129..12992)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C9L929_BLAHA
ABC-type transport system {ECO:0000313|EMBL:CDC11171.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_052G1_scaffold_389_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12996..14030)
DNA (1035bp) protein (345aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R9P6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC44575.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type multidrug transport system, ATPase component
L3_060_052G1_scaffold_389_15
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14208..14930)
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L927_BLAHA
L3_060_052G1_scaffold_389_16
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14943..16826)
DNA (1884bp) protein (628aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AEQ4_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
glucose-inhibited division protein A
L3_060_052G1_scaffold_389_17
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16862..18235)
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
tRNA modification GTPase MnmE n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PN49_9FIRM
tRNA modification GTPase trmE
L3_060_052G1_scaffold_389_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(18332..19129)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44579.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted RNA-binding protein
L3_060_052G1_scaffold_389_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(19147..20424)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R9Q1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44580.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_060_052G1_scaffold_389_20
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20656..21027)
DNA (372bp) protein (124aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AEQ8_9FIRM
L3_060_052G1_scaffold_389_21
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21076..21210)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=4 Tax=Firmicutes RepID=C9L920_BLAHA
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
LSU ribosomal protein L34P
L3_060_052G1_scaffold_389_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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21987..23345
DNA (1359bp) protein (453aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SDB3_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
chromosomal replication initiator protein DnaA
L3_060_052G1_scaffold_389_23
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23624..24736
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Lachnospiraceae RepID=F3AER1_9FIRM
L3_060_052G1_scaffold_389_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

24748..24957
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R6T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44593.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_052G1_scaffold_389_25
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24980..26062
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AER3_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
DNA replication and repair protein RecF
L3_060_052G1_scaffold_389_26
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26106..28031
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L915_BLAHA
L3_060_052G1_scaffold_389_27
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28059..30551
DNA (2493bp) protein (831aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L914_BLAHA
L3_060_052G1_scaffold_389_28
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30590..31171
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L913_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC08801.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_052G1_scaffold_389_29
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31184..31900
DNA (717bp) protein (239aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NKB4_9FIRM
L3_060_052G1_scaffold_389_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(31956..32768)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44606.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
AraC-type DNA-binding domain-containing proteins
Displaying items 1-30 of 32 in total

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