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L3_060_052G1_scaffold_680

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_052G1_scaffold_680_1
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(310..465)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BMY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66877.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
L3_060_052G1_scaffold_680_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(612..836)
DNA (225bp) protein (75aa)
Toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CXQ8_CLOSY
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:ERI74017.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_060_052G1_scaffold_680_3
unknown

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1073..1357
DNA (285bp) protein (95aa)

This feature has no annotations

L3_060_052G1_scaffold_680_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1379..2266
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZDW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38066.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
integrase
L3_060_052G1_scaffold_680_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2307..3290)
DNA (984bp) protein (328aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37065.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_060_052G1_scaffold_680_6
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3325..3552)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NIG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10985.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_052G1_scaffold_680_7
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3566..3850)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NXL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10986.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_060_052G1_scaffold_680_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4000..4188)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXV8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN79609.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_060_052G1_scaffold_680_9
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4181..7045)
DNA (2865bp) protein (955aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AAP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85211.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_060_052G1_scaffold_680_10
unknown

Not on your lists

comp(7055..7159)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_060_052G1_scaffold_680_11
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7159..7530)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FGX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01302.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L3_060_052G1_scaffold_680_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(7913..8788)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46988.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_052G1_scaffold_680_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(8790..9767)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46990.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Phage tail fiber protein
L3_060_052G1_scaffold_680_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9755..10690)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46993.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_052G1_scaffold_680_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10693..13788)
DNA (3096bp) protein (1032aa)
UPI0003D5ADB7 related cluster n=1 Tax=unknown RepID=UPI0003D5ADB7
Uncharacterized protein {ECO:0000313|EMBL:ETI96931.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
phage tail tape measure protein
L3_060_052G1_scaffold_680_16
unknown

Not on your lists

comp(14018..14302)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_060_052G1_scaffold_680_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14317..14883)
DNA (567bp) protein (189aa)
UPI0003D6147A related cluster n=1 Tax=unknown RepID=UPI0003D6147A
Uncharacterised protein {ECO:0000313|EMBL:CEQ26560.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_052G1_scaffold_680_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14883..15272)
DNA (390bp) protein (130aa)
UPI0003D5E9DB related cluster n=1 Tax=unknown RepID=UPI0003D5E9DB
Gp9 protein {ECO:0000313|EMBL:ETI96928.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_060_052G1_scaffold_680_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15273..15623)
DNA (351bp) protein (117aa)
UPI0003D5CDE0 related cluster n=1 Tax=unknown RepID=UPI0003D5CDE0
Uncharacterized protein {ECO:0000313|EMBL:ETI96927.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_060_052G1_scaffold_680_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15608..15958)
DNA (351bp) protein (117aa)
UPI0003D5A9BF related cluster n=1 Tax=unknown RepID=UPI0003D5A9BF
Uncharacterized protein {ECO:0000313|EMBL:ETI96926.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_060_052G1_scaffold_680_21

Not on your lists

comp(15930..16235)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J7R0_DESRM
Gp6 protein {ECO:0000313|EMBL:AHF24085.1}; TaxID=1393602 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig643.;"
hypothetical protein
L3_060_052G1_scaffold_680_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16262..17437)
DNA (1176bp) protein (392aa)
UPI0003D66DDC related cluster n=1 Tax=unknown RepID=UPI0003D66DDC
Major capsid protein a {ECO:0000313|EMBL:CEQ26628.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage major capsid protein
L3_060_052G1_scaffold_680_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17455..18120)
DNA (666bp) protein (222aa)
UPI0003D655F6 related cluster n=1 Tax=unknown RepID=UPI0003D655F6
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage protease
L3_060_052G1_scaffold_680_24

Not on your lists

comp(18117..19265)
DNA (1149bp) protein (383aa)
UPI0003D5C4B6 related cluster n=1 Tax=unknown RepID=UPI0003D5C4B6
HK97 family phage portal protein {ECO:0000313|EMBL:AHF24088.1}; TaxID=1393602 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig643.;"
HK97 family phage portal protein
L3_060_052G1_scaffold_680_25
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19280..20917)
DNA (1638bp) protein (546aa)
Putative phage terminase, large subunit n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB57_CLOBO
Terminase {ECO:0000313|EMBL:CEQ26573.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage terminase-like protein, large subunit
L3_060_052G1_scaffold_680_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20907..21230)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5F9_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03365.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_060_052G1_scaffold_680_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21351..22082)
DNA (732bp) protein (244aa)
UPI0003D67DC2 related cluster n=1 Tax=unknown RepID=UPI0003D67DC2
Gp54 protein {ECO:0000313|EMBL:CEQ26577.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Gp54 protein
Displaying 27 items

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