ggKbase home page

L3_060_052G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_052G1_scaffold_69_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

377..1009
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D2CFF5
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32818.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_060_052G1_scaffold_69_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1097..1726
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZA5_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32818.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_060_052G1_scaffold_69_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1849..2343)
DNA (495bp) protein (165aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZA3_9FIRM
ribonucleoside-triphosphate reductase activating protein
L3_060_052G1_scaffold_69_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2343..4466)
DNA (2124bp) protein (708aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EFR32852.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EFR32852.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZA2_9FIRM
L3_060_052G1_scaffold_69_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4672..5478
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZA1_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32847.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L3_060_052G1_scaffold_69_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5631..6464
DNA (834bp) protein (278aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZA0_9FIRM
L3_060_052G1_scaffold_69_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6466..7422
DNA (957bp) protein (319aa)
Bile acid transporter n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ99_9FIRM
Bile acid transporter {ECO:0000313|EMBL:EFR32850.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
bile acid:sodium symporter
L3_060_052G1_scaffold_69_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7480..7956)
DNA (477bp) protein (159aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ98_9FIRM
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EFR32834.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_060_052G1_scaffold_69_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8034..8339
DNA (306bp) protein (102aa)
Cupin domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ97_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EFR32854.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
cupin
L3_060_052G1_scaffold_69_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8524..10125)
DNA (1602bp) protein (534aa)
ABC transporter, ATP-binding protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KXK4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR33485.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
macrolide ABC transporter ATP-binding protein
L3_060_052G1_scaffold_69_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10509..12809)
DNA (2301bp) protein (767aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EFR32833.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EFR32833.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ96_9FIRM
glutamate synthase (NADPH), homotetrameric
L3_060_052G1_scaffold_69_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12971..13753
DNA (783bp) protein (261aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
proB; Glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ95_9FIRM
L3_060_052G1_scaffold_69_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13731..14987
DNA (1257bp) protein (419aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
proA; Gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ94_9FIRM
L3_060_052G1_scaffold_69_14
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15611..17683)
DNA (2073bp) protein (691aa)
C4-dicarboxylate ABC transporter n=1 Tax=Peptoniphilus lacrimalis RepID=UPI000374F9F4
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EFK38306.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
TRAP transporter, 4TM/12TM fusion protein
L3_060_052G1_scaffold_69_15
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17673..18203)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Peptoniphilus lacrimalis RepID=UPI00037B1B37
Uncharacterized protein {ECO:0000313|EMBL:EFK38311.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
hypothetical protein
L3_060_052G1_scaffold_69_16
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18203..19267)
DNA (1065bp) protein (355aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Peptoniphilus sp. oral taxon 836 str. F0141 RepID=D8FKT0_9FIRM
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EFK38307.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
TRAP transporter solute receptor TAXI family protein
L3_060_052G1_scaffold_69_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19635..20366
DNA (732bp) protein (244aa)
Protein TraX n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ90_9FIRM
Protein TraX {ECO:0000313|EMBL:EFR32820.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
L3_060_052G1_scaffold_69_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20450..21850
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E14DA2
Uncharacterized protein {ECO:0000313|EMBL:CDA76214.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
putative efflux protein, MATE family
L3_060_052G1_scaffold_69_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21993..22934
DNA (942bp) protein (314aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFR32827.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFR32827.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
phosphoglycerate dehydrogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002887E03
D-3-phosphoglycerate dehydrogenase
L3_060_052G1_scaffold_69_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23083..24699
DNA (1617bp) protein (539aa)
MutS domain V protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ88_9FIRM
MutS domain V protein {ECO:0000313|EMBL:EFR32819.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DNA mismatch repair protein MutS domain-containing protein
L3_060_052G1_scaffold_69_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24820..25425
DNA (606bp) protein (202aa)
Phosphoglycerate mutase family protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ87_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EFR32848.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
fructose-2,6-bisphosphatase
L3_060_052G1_scaffold_69_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25435..26370
DNA (936bp) protein (312aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ86_9FIRM
L3_060_052G1_scaffold_69_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26367..28151
DNA (1785bp) protein (595aa)
Thioredoxin n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ85_9FIRM
Thioredoxin {ECO:0000313|EMBL:EFR32831.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thioredoxin
L3_060_052G1_scaffold_69_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28215..28850)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ84_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32835.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
HAD-superfamily hydrolase, subfamily IB
L3_060_052G1_scaffold_69_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28927..29967
DNA (1041bp) protein (347aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ83_9FIRM
L3_060_052G1_scaffold_69_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30034..30738
DNA (705bp) protein (235aa)
TIGR02206 family protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ82_9FIRM
TIGR02206 family protein {ECO:0000313|EMBL:EFR32823.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Integral membrane protein (intg_mem_TP0381).
L3_060_052G1_scaffold_69_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30765..31520)
DNA (756bp) protein (252aa)
Formate/nitrite transporter n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ80_9FIRM
Formate/nitrite transporter {ECO:0000313|EMBL:EFR32816.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
formate/nitrite transporter
L3_060_052G1_scaffold_69_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31634..33049)
DNA (1416bp) protein (472aa)
Na+/H+ antiporter NhaC n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ79_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EFR32843.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Na+/H+ antiporter NhaC
L3_060_052G1_scaffold_69_29
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33131..33670
DNA (540bp) protein (180aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
apt; Adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ78_9FIRM
L3_060_052G1_scaffold_69_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33929..34423)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ73_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32846.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
Displaying items 1-30 of 110 in total

View Taxonomy