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L3_060_052G1_scaffold_423

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_052G1_scaffold_423_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(365..2332)
DNA (1968bp) protein (656aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ACA57466.1}; EC=3.6.1.- {ECO:0000313|EMBL:ACA57466.1};; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
ATP-dependent DNA helicase RecG n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002881C42
L3_060_052G1_scaffold_423_2
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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2557..5571
DNA (3015bp) protein (1005aa)
Lantibiotic dehydratase domain-containing protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F898
Thiopeptide-type bacteriocin biosynthesis domain-containing protein {ECO:0000313|EMBL:EOS70395.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Lantibiotic dehydratase domain-containing protein
L3_060_052G1_scaffold_423_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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5565..6848
DNA (1284bp) protein (428aa)
subtilin biosynthesis protein SpaC n=1 Tax=Clostridium sp. JC122 RepID=UPI000287FF84
Uncharacterized protein {ECO:0000313|EMBL:CCY26059.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Subtilin biosynthesis protein SpaC
L3_060_052G1_scaffold_423_4
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6923..7615
DNA (693bp) protein (231aa)
NADPH-dependent FMN reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002896E5A
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ADY20439.1}; TaxID=930170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. finitimus (strain YBT-020).;"
L3_060_052G1_scaffold_423_5
unknown

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7671..7916
DNA (246bp) protein (82aa)

This feature has no annotations

L3_060_052G1_scaffold_423_6
unknown

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7995..8150
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00036E33BF
L3_060_052G1_scaffold_423_7
Lactobacillus farraginis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8280..9140
DNA (861bp) protein (287aa)
Predicted metal-dependent membrane protease {ECO:0000313|EMBL:GAF36947.1}; TaxID=1423743 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus farraginis DSM 18382 = JCM 14108.;"
L3_060_052G1_scaffold_423_8
unknown

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9182..9508
DNA (327bp) protein (109aa)

This feature has no annotations

L3_060_052G1_scaffold_423_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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9612..10793
DNA (1182bp) protein (394aa)
Lanthionine synthetase C family protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888B13
Uncharacterized protein {ECO:0000313|EMBL:CCY26059.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_060_052G1_scaffold_423_10
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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10808..12565
DNA (1758bp) protein (586aa)
lantibiotic ABC transporter ATP-binding protein, partial n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289856E
Uncharacterized protein {ECO:0000313|EMBL:EOS70396.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
putative lantibiotic ABC transporterATP-binding protein
L3_060_052G1_scaffold_423_11
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12716..15295)
DNA (2580bp) protein (860aa)
TraE protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287B394
Orf26 family protein {ECO:0000313|EMBL:EFF64551.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
traE like protein
L3_060_052G1_scaffold_423_12
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15309..15905)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A082A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG09228.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
L3_060_052G1_scaffold_423_13
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15916..16839)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002883B7F
Uncharacterized protein {ECO:0000313|EMBL:EMZ25844.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_060_052G1_scaffold_423_14
unknown

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comp(16880..17524)
DNA (645bp) protein (215aa)

This feature has no annotations

L3_060_052G1_scaffold_423_15
unknown

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comp(17539..17922)
DNA (384bp) protein (128aa)

This feature has no annotations

L3_060_052G1_scaffold_423_16
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18030..18704)
DNA (675bp) protein (225aa)
Protein TraX n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N6T4_9FIRM
Protein TraX {ECO:0000313|EMBL:EFI42597.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
hypothetical protein
L3_060_052G1_scaffold_423_17
unknown

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comp(18734..19357)
DNA (624bp) protein (208aa)

This feature has no annotations

L3_060_052G1_scaffold_423_18
unknown

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comp(19374..19865)
DNA (492bp) protein (164aa)

This feature has no annotations

L3_060_052G1_scaffold_423_19
unknown

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comp(19881..20513)
DNA (633bp) protein (211aa)

This feature has no annotations

L3_060_052G1_scaffold_423_20
unknown

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comp(20579..21232)
DNA (654bp) protein (218aa)

This feature has no annotations

L3_060_052G1_scaffold_423_21
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21350..22207)
DNA (858bp) protein (286aa)
RNA polymerase sigma-70 factor, sigma-B/F/G subfamily n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GSU1_FILAD
RNA polymerase sigma-B factor
RNA polymerase sigma-B factor {ECO:0000313|EMBL:EFE27926.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
L3_060_052G1_scaffold_423_22
unknown

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comp(22208..22477)
DNA (270bp) protein (90aa)

This feature has no annotations

L3_060_052G1_scaffold_423_23
unknown

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comp(22498..23133)
DNA (636bp) protein (212aa)

This feature has no annotations

L3_060_052G1_scaffold_423_24
unknown

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comp(23150..23569)
DNA (420bp) protein (140aa)

This feature has no annotations

L3_060_052G1_scaffold_423_25
unknown

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comp(23592..24002)
DNA (411bp) protein (137aa)

This feature has no annotations

L3_060_052G1_scaffold_423_26
unknown

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comp(24018..25079)
DNA (1062bp) protein (354aa)

This feature has no annotations

L3_060_052G1_scaffold_423_27
Columba livia, Columba, Columbiformes, Aves, Chordata, Metazoa

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comp(25211..34063)
DNA (8853bp) protein (2951aa)
Ribosome-binding protein 1 n=1 Tax=Columba livia RepID=R7VVQ2_COLLI
Ribosome-binding protein 1 {ECO:0000313|EMBL:EMC82863.1}; TaxID=8932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.;" source="Columba livia (Rock dove).;"
hypothetical protein
L3_060_052G1_scaffold_423_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34220..35257)
DNA (1038bp) protein (346aa)
Copper amine oxidase N-terminal domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYE1_9FIRM
Copper amine oxidase N-terminal domain protein {ECO:0000313|EMBL:EFR33067.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
exported protein of unknown function
Displaying 28 items

View Taxonomy