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L3_060_057G1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_25_1
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86..538
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5X8T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12033.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L3_060_057G1_scaffold_25_2
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

611..988
DNA (378bp) protein (126aa)
Iron (Metal) dependent repressor DtxR family n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y607_9FIRM
Iron (Metal) dependent repressor DtxR family {ECO:0000313|EMBL:CDA12032.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Mn-dependent transcriptional regulator
L3_060_057G1_scaffold_25_3
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1162..2712)
DNA (1551bp) protein (517aa)
Glycoside hydrolase family protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XTD4_9FIRM
Glycoside hydrolase family protein {ECO:0000313|EMBL:CDA12031.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
glycoside hydrolase family protein
L3_060_057G1_scaffold_25_4
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3034..3777
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein BN695_00359 n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XB41_9FIRM
Probable transcriptional regulatory protein BN695_00359 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
conserved hypothetical protein TIGR01033
L3_060_057G1_scaffold_25_5
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3879..4031
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XI35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12029.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
type 11 methyltransferase
L3_060_057G1_scaffold_25_6
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4024..4281
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5X8T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12028.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
type 11 methyltransferase
L3_060_057G1_scaffold_25_7
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4540..4941
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y603_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12027.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Methyltransferase domain.
L3_060_057G1_scaffold_25_8
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4973..6172)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XTC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA12026.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hypothetical protein
L3_060_057G1_scaffold_25_9
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6190..7056)
DNA (867bp) protein (289aa)
ABC transporter ATP-binding protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XB37_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA12025.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
ABC transporter
L3_060_057G1_scaffold_25_10
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7135..8796)
DNA (1662bp) protein (554aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XI31_9FIRM
L3_060_057G1_scaffold_25_11
unknown

Not on your lists

comp(9200..9448)
DNA (249bp) protein (83aa)

This feature has no annotations

L3_060_057G1_scaffold_25_12
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9608..10372)
DNA (765bp) protein (255aa)
Predicted transcriptional regulators n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5X8T2_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDA12023.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Predicted transcriptional regulators
L3_060_057G1_scaffold_25_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10651..11883)
DNA (1233bp) protein (411aa)
Reverse transcriptase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PHT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71637.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Retron-type reverse transcriptase
L3_060_057G1_scaffold_25_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11973..12218)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90705.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_060_057G1_scaffold_25_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12351..12887)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VLD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95019.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_060_057G1_scaffold_25_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13055..13840)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KE16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36888.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
xylose isomerase
L3_060_057G1_scaffold_25_17
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(13909..14595)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZM38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD47180.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L3_060_057G1_scaffold_25_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14773..15030)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2CPK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI95222.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_060_057G1_scaffold_25_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15069..17189)
DNA (2121bp) protein (707aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MLS7_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL34710.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_060_057G1_scaffold_25_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17363..22963)
DNA (5601bp) protein (1867aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CGK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD26135.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
DNA methylase
L3_060_057G1_scaffold_25_21
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22979..23278)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PBZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41661.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
hypothetical protein
L3_060_057G1_scaffold_25_22
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23259..23519)
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=root RepID=U2NUE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41660.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
hypothetical protein
L3_060_057G1_scaffold_25_23
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23532..23828)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J498_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79169.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_060_057G1_scaffold_25_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23901..23990)
DNA (90bp) protein (30aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=N9WW92_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ07366.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_060_057G1_scaffold_25_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23990..28240)
DNA (4251bp) protein (1417aa)
Uncharacterized protein n=5 Tax=root RepID=N9WWS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07365.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Cna protein B-type domain.
L3_060_057G1_scaffold_25_26
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28525..29460)
DNA (936bp) protein (312aa)
Chromosome partitioning protein parB n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBS5_9FIRM
Chromosome partitioning protein parB {ECO:0000313|EMBL:EFW04487.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ParB-like partition proteins
L3_060_057G1_scaffold_25_27
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29417..30241)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CFE3_9FIRM
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:EFW04486.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Chromosome partitioning protein parA
L3_060_057G1_scaffold_25_28
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30776..30955)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2QKF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41778.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
hypothetical protein
L3_060_057G1_scaffold_25_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30952..32343)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CHB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD26126.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_060_057G1_scaffold_25_30
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32493..32969)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U2NVQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK42130.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
hypothetical protein
Displaying items 1-30 of 188 in total

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