ggKbase home page

L3_060_057G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_27_1
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(343..1284)
DNA (942bp) protein (314aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SH44_9BIFI
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERH31268.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
hypothetical protein
L3_060_057G1_scaffold_27_2
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1342..2571
DNA (1230bp) protein (410aa)
dapE; succinyl-diaminopimelate desuccinylase DapE (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCF0_9BIFI
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:ERH31269.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
L3_060_057G1_scaffold_27_3
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2799..6323
DNA (3525bp) protein (1175aa)
ribonuclease G n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B56AF9
S1 RNA binding domain protein {ECO:0000313|EMBL:ERH31270.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
rne; Ribonuclease G
L3_060_057G1_scaffold_27_4
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6570..6878
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B3D028
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
rplU; 50S ribosomal protein L21
L3_060_057G1_scaffold_27_5
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6929..7180
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B34B46
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
rpmA; 50S ribosomal protein L27
L3_060_057G1_scaffold_27_6
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7505..9346
DNA (1842bp) protein (614aa)
GTPase Obg n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SH51_9BIFI
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
GTP-binding protein
L3_060_057G1_scaffold_27_7
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9361..10497
DNA (1137bp) protein (379aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
gamma-glutamyl kinase n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B5BC07
proB; glutamate 5-kinase
L3_060_057G1_scaffold_27_8
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10507..11703
DNA (1197bp) protein (399aa)
aspartate aminotransferase (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B6AB2D
Putative aspartate transaminase {ECO:0000313|EMBL:ERH31275.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
L3_060_057G1_scaffold_27_9
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12089..12322
DNA (234bp) protein (78aa)
Protein translocase subunit SecE n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RB70_9BIFI
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
preprotein translocase subunit SecE
L3_060_057G1_scaffold_27_10
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12374..13114
DNA (741bp) protein (247aa)
transcription antitermination protein NusG n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B6FC41
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
transcription antiterminator
L3_060_057G1_scaffold_27_11
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13477..13908
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCG0_9BIFI
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
rplK; 50S ribosomal protein L11
L3_060_057G1_scaffold_27_12
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13971..14666
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1QV46_9BIFI
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
rplA; 50S ribosomal protein L1
L3_060_057G1_scaffold_27_13
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15436..16302
DNA (867bp) protein (289aa)
Aldo/keto reductase (EC:1.1.1.274)
Putative 2,5-diketo-D-gluconic acid reductase A n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SKT3_9BIFI
Putative 2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:ERH31282.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
L3_060_057G1_scaffold_27_14
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16302..17051
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SH63_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ERH31283.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
hypothetical protein
L3_060_057G1_scaffold_27_15
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17253..17906
DNA (654bp) protein (218aa)
ABC transporter, permease protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCG4_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ERH31284.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
hisM3; hism3
L3_060_057G1_scaffold_27_16
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17893..18567
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1QV51_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ERH31285.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
ABC transporter, permease protein, probably General L-amino acid porter
L3_060_057G1_scaffold_27_17
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18560..19381
DNA (822bp) protein (274aa)
glnQ; glutamine transport ATP-binding protein glnQ (EC:3.6.3.20)
Glutamate ABC transporter, ATP-binding protein GluA n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RB80_9BIFI
Glutamate ABC transporter, ATP-binding protein GluA {ECO:0000313|EMBL:ERH31286.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
L3_060_057G1_scaffold_27_18
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19458..20357
DNA (900bp) protein (300aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SKT9_9BIFI
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ERH31287.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
amino acid ABC transporter substrate-binding protein
L3_060_057G1_scaffold_27_19
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21028..22416
DNA (1389bp) protein (463aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B3B1F5
Phosphate ABC transporter, phosphate-binding protein PstS {ECO:0000313|EMBL:ERH31288.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
phosphate-binding transport protein of ABC transporter system
L3_060_057G1_scaffold_27_20
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22420..23523
DNA (1104bp) protein (368aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCG9_9BIFI
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:ERH31289.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
phosphate ABC transporter permease
L3_060_057G1_scaffold_27_21
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23524..24609
DNA (1086bp) protein (362aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1QV56_9BIFI
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ERH31290.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
phosphate ABC transporter substrate-binding protein
L3_060_057G1_scaffold_27_22
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24627..25406
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
ABC transporter, ATP binding protein, probably Phosphate transporter, PstSCAB (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RB85_9BIFI
L3_060_057G1_scaffold_27_23
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25538..26923
DNA (1386bp) protein (462aa)
Putative permease n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SKU4_9BIFI
Putative permease {ECO:0000313|EMBL:ERH31292.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
xanthine/uracil permease family protein
L3_060_057G1_scaffold_27_24
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27191..30298)
DNA (3108bp) protein (1036aa)
ABC transporter permease n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B443D7
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERH31293.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
ileS; ABC transporter permease
L3_060_057G1_scaffold_27_25
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30308..31009)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein (EC:3.6.3.31)
ABC transporter, ATP-binding protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCH4_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERH31294.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
L3_060_057G1_scaffold_27_26
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31332..32357)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B78A35
G5 domain protein {ECO:0000313|EMBL:ERH31295.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
putative G5 domain protein
L3_060_057G1_scaffold_27_27
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32589..32939)
DNA (351bp) protein (117aa)
Thioredoxin n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RB91_9BIFI
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
thioredoxin
L3_060_057G1_scaffold_27_28
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33084..33713
DNA (630bp) protein (210aa)
ADP-ribose pyrophosphatase n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B6D269
Uncharacterized protein {ECO:0000313|EMBL:ERH31297.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
hypothetical protein
L3_060_057G1_scaffold_27_29
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33837..35768
DNA (1932bp) protein (644aa)
alpha/beta hydrolase n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B74DB8
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERH31298.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
putative alpha beta hydrolase
L3_060_057G1_scaffold_27_30
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35778..36182
DNA (405bp) protein (135aa)
Glycine cleavage system H protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RCH9_9BIFI
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
glycine cleavage system H protein
Displaying items 1-30 of 144 in total

View Taxonomy