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L3_060_057G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_55_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(479..1810)
DNA (1332bp) protein (444aa)
UPI0003D670E5 related cluster n=1 Tax=unknown RepID=UPI0003D670E5
Putrescine:ornithine antiporter {ECO:0000313|EMBL:ETI86565.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
amino acid permease
L3_060_057G1_scaffold_55_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2320..3039
DNA (720bp) protein (240aa)
YjbE family integral membrane protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K915_9FIRM
YjbE family integral membrane protein {ECO:0000313|EMBL:EHR35567.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Membrane protein TerC, possibly involved in tellurium resistance
L3_060_057G1_scaffold_55_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3061..3741
DNA (681bp) protein (227aa)
UPI0003D5F592 related cluster n=1 Tax=unknown RepID=UPI0003D5F592
Membrane protein TerC, possibly involved in tellurium resistance {ECO:0000313|EMBL:ETI86567.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Membrane protein TerC, possibly involved in tellurium resistance
L3_060_057G1_scaffold_55_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3778..4542)
DNA (765bp) protein (255aa)
UPI0003D67E78 related cluster n=1 Tax=unknown RepID=UPI0003D67E78
L-allo-threonine dehydrogenase {ECO:0000313|EMBL:KGF12261.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
short-chain dehydrogenase/reductase SDR
L3_060_057G1_scaffold_55_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4692..5483
DNA (792bp) protein (264aa)
UPI0003D5F1EB related cluster n=1 Tax=unknown RepID=UPI0003D5F1EB
Uncharacterized protein {ECO:0000313|EMBL:ETI87252.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5480..5965
DNA (486bp) protein (162aa)
UPI0003D622B8 related cluster n=1 Tax=unknown RepID=UPI0003D622B8
Inner membrane protein yjiG {ECO:0000313|EMBL:ETI87253.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
nucleoside recognition domain-containing protein
L3_060_057G1_scaffold_55_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6008..7177
DNA (1170bp) protein (390aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
UPI0003D65764 related cluster n=1 Tax=unknown RepID=UPI0003D65764
L3_060_057G1_scaffold_55_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7241..7675)
DNA (435bp) protein (145aa)
UPI0003D6302D related cluster n=1 Tax=unknown RepID=UPI0003D6302D
Uncharacterized protein {ECO:0000313|EMBL:ETI87255.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7950..8867)
DNA (918bp) protein (306aa)
UPI0003D658A5 related cluster n=1 Tax=unknown RepID=UPI0003D658A5
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:ETI87256.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
periplasmic binding protein/LacI transcriptional regulator
L3_060_057G1_scaffold_55_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8882..9814)
DNA (933bp) protein (311aa)
UPI0003D67542 related cluster n=1 Tax=unknown RepID=UPI0003D67542
Ribose ABC transporter permease protein {ECO:0000313|EMBL:ETI87257.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
inner-membrane translocator
L3_060_057G1_scaffold_55_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9818..11299)
DNA (1482bp) protein (494aa)
UPI0003D673B5 related cluster n=1 Tax=unknown RepID=UPI0003D673B5
Ribose transport ATP-binding protein rbsa {ECO:0000313|EMBL:ETI87258.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ABC transporter
L3_060_057G1_scaffold_55_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11317..11712)
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5F361 related cluster n=1 Tax=unknown RepID=UPI0003D5F361
transport protein RbsD/FucU
L3_060_057G1_scaffold_55_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11714..12586)
DNA (873bp) protein (291aa)
UPI0003D68536 related cluster n=1 Tax=unknown RepID=UPI0003D68536
Ribokinase {ECO:0000313|EMBL:ETI87260.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribokinase
L3_060_057G1_scaffold_55_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12784..13266
DNA (483bp) protein (161aa)
UPI0003D6451A related cluster n=1 Tax=unknown RepID=UPI0003D6451A
Uncharacterized protein {ECO:0000313|EMBL:ETI87261.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13344..14423
DNA (1080bp) protein (360aa)
UPI0003D5C0D0 related cluster n=1 Tax=unknown RepID=UPI0003D5C0D0
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ETI87738.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
RND family efflux transporter MFP subunit
L3_060_057G1_scaffold_55_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14410..15027
DNA (618bp) protein (206aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5BCBC related cluster n=1 Tax=unknown RepID=UPI0003D5BCBC
DNA-3-methyladenine glycosylase
L3_060_057G1_scaffold_55_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15120..16331
DNA (1212bp) protein (404aa)
UPI0003D61DBE related cluster n=1 Tax=unknown RepID=UPI0003D61DBE
Major facilitator superfamily permease {ECO:0000313|EMBL:ETI87740.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
MFS transporter
L3_060_057G1_scaffold_55_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16328..17074
DNA (747bp) protein (249aa)
UPI0003D673CB related cluster n=1 Tax=unknown RepID=UPI0003D673CB
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:ETI87741.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17197..18261
DNA (1065bp) protein (355aa)
UPI0003D5C908 related cluster n=1 Tax=unknown RepID=UPI0003D5C908
Zeta toxin family protein {ECO:0000313|EMBL:ETI87742.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
zeta toxin; poison-antidote element
L3_060_057G1_scaffold_55_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18322..19257
DNA (936bp) protein (312aa)
UPI0003D5B5CF related cluster n=1 Tax=unknown RepID=UPI0003D5B5CF
Uncharacterized protein {ECO:0000313|EMBL:ETI87743.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19333..20055)
DNA (723bp) protein (241aa)
UPI0003D5F12E related cluster n=1 Tax=unknown RepID=UPI0003D5F12E
Uncharacterized protein {ECO:0000313|EMBL:ETI87744.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20049..21302)
DNA (1254bp) protein (418aa)
UPI0003D5D27E related cluster n=1 Tax=unknown RepID=UPI0003D5D27E
Radical SAM protein {ECO:0000313|EMBL:ETI87745.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
radical SAM domain protein
L3_060_057G1_scaffold_55_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21443..21799)
DNA (357bp) protein (119aa)
UPI0003D627BA related cluster n=1 Tax=unknown RepID=UPI0003D627BA
Protein secretion chaperonin {ECO:0000313|EMBL:ETI87746.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
protein secretion chaperonin
L3_060_057G1_scaffold_55_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21799..22566)
DNA (768bp) protein (256aa)
UPI0003D5F4DA related cluster n=1 Tax=unknown RepID=UPI0003D5F4DA
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ETI87747.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
3-hydroxybutyryl-CoA dehydratase
L3_060_057G1_scaffold_55_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22578..22904)
DNA (327bp) protein (109aa)
UPI0003D5A68A related cluster n=1 Tax=unknown RepID=UPI0003D5A68A
Uncharacterized protein {ECO:0000313|EMBL:ETI87748.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23037..25163)
DNA (2127bp) protein (709aa)
UPI0003D5EAA7 related cluster n=1 Tax=unknown RepID=UPI0003D5EAA7
Copper-exporting ATPase {ECO:0000313|EMBL:ETI87749.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
copper-translocating P-type ATPase
L3_060_057G1_scaffold_55_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25292..25930
DNA (639bp) protein (213aa)
UPI0003D5A14C related cluster n=1 Tax=unknown RepID=UPI0003D5A14C
Product YvyE {ECO:0000313|EMBL:ETI86642.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_060_057G1_scaffold_55_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26059..26274
DNA (216bp) protein (72aa)
UPI0003D5FF22 related cluster n=1 Tax=unknown RepID=UPI0003D5FF22
Uncharacterized protein {ECO:0000313|EMBL:ETI86641.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_060_057G1_scaffold_55_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26378..27328)
DNA (951bp) protein (317aa)
UPI0003D5A3FC related cluster n=1 Tax=unknown RepID=UPI0003D5A3FC
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ETI86640.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
LysR family transcriptional regulator
L3_060_057G1_scaffold_55_30
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27797..28069
DNA (273bp) protein (91aa)
UPI0003D5E97C related cluster n=1 Tax=unknown RepID=UPI0003D5E97C
Uncharacterized protein {ECO:0000313|EMBL:ETI86639.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
FeoA family protein
Displaying items 1-30 of 133 in total

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