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L3_060_057G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_56_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55429.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Transposase.
L3_060_057G1_scaffold_56_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124..1371)
DNA (1248bp) protein (416aa)
processing peptidase (EC:3.4.24.64)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C8X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35155.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_56_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1687..2514)
DNA (828bp) protein (276aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DHF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57234.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_060_057G1_scaffold_56_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2514..3794)
DNA (1281bp) protein (427aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DMI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57233.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nucleotide pyrophosphatase
L3_060_057G1_scaffold_56_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3810..4403)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35152.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_56_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4495..5829)
DNA (1335bp) protein (445aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BRX4_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI80904.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
sugar ABC transporter substrate-binding protein
L3_060_057G1_scaffold_56_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5907..6728)
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=3 Tax=Clostridiales RepID=G9YPY7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EHM52233.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sugar ABC transporter permease
L3_060_057G1_scaffold_56_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6742..7665)
DNA (924bp) protein (308aa)
ABC transporter, permease protein n=3 Tax=Clostridiales RepID=G9YPY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35148.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter permease
L3_060_057G1_scaffold_56_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7662..8714)
DNA (1053bp) protein (351aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57228.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
malK; Sugar ABC transporter, ATP-binding protein)
L3_060_057G1_scaffold_56_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9034..9816
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=3 Tax=Clostridiales RepID=G9YPY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35146.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
deoR; deoxyribose operon repressor
L3_060_057G1_scaffold_56_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10050..12200)
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Clostridiales RepID=G9YPY2_9FIRM
L3_060_057G1_scaffold_56_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12506..12772)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=3 Tax=Clostridiales RepID=G9YPY1_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
30S ribosomal protein S15
L3_060_057G1_scaffold_56_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13015..13530
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57224.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_56_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13639..14196
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DHE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80892.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_057G1_scaffold_56_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14288..14947
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35141.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_56_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14958..16379
DNA (1422bp) protein (474aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPX6_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EHM52222.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_060_057G1_scaffold_56_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16433..19312)
DNA (2880bp) protein (960aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57221.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
S-layer domain-containing protein
L3_060_057G1_scaffold_56_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19684..21021)
DNA (1338bp) protein (446aa)
Transglutaminase-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CDT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57220.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_060_057G1_scaffold_56_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21126..24896)
DNA (3771bp) protein (1257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ANL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57219.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M14 carboxypeptidase A
L3_060_057G1_scaffold_56_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25207..26070)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57218.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Protein of unknown function (DUF3298).
L3_060_057G1_scaffold_56_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26072..26557)
DNA (486bp) protein (162aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CDX0_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ECF subfamily RNA polymerase sigma-24 factor
L3_060_057G1_scaffold_56_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26660..27133)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2CJG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57216.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
lipoprotein
L3_060_057G1_scaffold_56_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27130..28050)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52297.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
GDSL-like Lipase/Acylhydrolase.
L3_060_057G1_scaffold_56_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28065..28772)
DNA (708bp) protein (236aa)
TIGR02254 family HAD hydrolase n=2 Tax=Clostridiales RepID=H1C8V4_9FIRM
TIGR02254 family HAD hydrolase {ECO:0000313|EMBL:EHO35131.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_56_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28788..29243)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67468.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_057G1_scaffold_56_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29240..30097)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI67467.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_057G1_scaffold_56_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30040..30822)
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=2 Tax=Clostridiales RepID=G9YPW0_9FIRM
Metal cation transporter, ZIP family {ECO:0000313|EMBL:ERI67466.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
divalent heavy-metal cations transporter
L3_060_057G1_scaffold_56_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30910..31386)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35127.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_56_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31752..32267)
DNA (516bp) protein (172aa)
Ethanolamine utilization protein, EutP n=3 Tax=Clostridiales RepID=H1C8U9_9FIRM
Ethanolamine utilization protein, EutP {ECO:0000313|EMBL:EHO35126.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ethanolamine utilization protein
L3_060_057G1_scaffold_56_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32277..32708)
DNA (432bp) protein (144aa)
BMC domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6P9_9CLOT
BMC domain protein {ECO:0000313|EMBL:ERI67463.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Ethanolamine utilization protein
Displaying items 1-30 of 123 in total

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