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L3_060_057G1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_179_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115..354)
DNA (240bp) protein (80aa)
UPF0109 protein HMPREF0216_01786 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF71_9CLOT
UPF0109 protein HMPREF0216_01786 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_060_057G1_scaffold_179_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(416..661)
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG84_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsP; ribosomal protein S16
L3_060_057G1_scaffold_179_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(698..2047)
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF44_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ffh; signal recognition particle protein
L3_060_057G1_scaffold_179_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2064..2393)
DNA (330bp) protein (110aa)
UPF0122 protein A500_04696 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDP4_9CLOT
UPF0122 protein A500_04696 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_060_057G1_scaffold_179_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2801..3715)
DNA (915bp) protein (305aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFY4_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ftsY; signal recognition particle-docking protein FtsY
L3_060_057G1_scaffold_179_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3727..7284)
DNA (3558bp) protein (1186aa)
Chromosome partition protein Smc n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF77_9CLOT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
smc; chromosome partition protein Smc
L3_060_057G1_scaffold_179_7
unknown

Not on your lists

comp(7296..7394)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_060_057G1_scaffold_179_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7539..8567)
DNA (1029bp) protein (343aa)
Prevent-host-death family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF47_9CLOT
Prevent-host-death family protein {ECO:0000313|EMBL:EKY26608.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
radical SAM domain-containing protein
L3_060_057G1_scaffold_179_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8560..9258)
DNA (699bp) protein (233aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rnc; ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF35_9CLOT
L3_060_057G1_scaffold_179_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9385..9615)
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFZ1_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
acpP; acyl carrier protein
L3_060_057G1_scaffold_179_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9752..10753)
DNA (1002bp) protein (334aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Phosphate acyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF81_9CLOT
plsX; glycerol-3-phosphate acyltransferase PlsX
L3_060_057G1_scaffold_179_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10812..10997)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG94_9CLOT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpmF; 50S ribosomal protein L32
L3_060_057G1_scaffold_179_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11010..11507)
DNA (498bp) protein (166aa)
Putative ACR n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF51_9CLOT
Putative ACR {ECO:0000313|EMBL:EKY26613.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_060_057G1_scaffold_179_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11667..12866)
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF38_9CLOT
L3_060_057G1_scaffold_179_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12909..13919)
DNA (1011bp) protein (337aa)
Phosphate acetyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFZ6_9CLOT
Phosphate acetyltransferase {ECO:0000313|EMBL:EKY26615.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
eutD; phosphotransacetylase
L3_060_057G1_scaffold_179_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14177..15382
DNA (1206bp) protein (402aa)
UPF0348 protein HMPREF0216_01801 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF86_9CLOT
UPF0348 protein HMPREF0216_01801 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
HIGH Nucleotidyl Transferase family protein
L3_060_057G1_scaffold_179_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15430..16602
DNA (1173bp) protein (391aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGA0_9CLOT
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:EKY26617.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ylbJ; sporulation integral membrane protein YlbJ
L3_060_057G1_scaffold_179_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16588..17124)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26618.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_060_057G1_scaffold_179_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17144..17623)
DNA (480bp) protein (160aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF43_9CLOT
L3_060_057G1_scaffold_179_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17639..18190)
DNA (552bp) protein (184aa)
RNA methyltransferase, RsmD family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG01_9CLOT
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EKY26620.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rsmD; rRNA methyltransferase RsmD
L3_060_057G1_scaffold_179_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18426..20456)
DNA (2031bp) protein (677aa)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGA6_9CLOT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EKY26622.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATP-dependent DNA helicase RecG
L3_060_057G1_scaffold_179_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20598..22244)
DNA (1647bp) protein (549aa)
DAK2 domain fusion protein YloV n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF59_9CLOT
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EKY26623.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
yloV; protein YloV
L3_060_057G1_scaffold_179_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22256..22606)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26624.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_060_057G1_scaffold_179_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22826..23017
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG07_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpmB; ribosomal protein L28
L3_060_057G1_scaffold_179_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23320..23958)
DNA (639bp) protein (213aa)
Thiamine diphosphokinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF96_9CLOT
Thiamine diphosphokinase {ECO:0000313|EMBL:EKY26626.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
thiN; hypothetical protein
L3_060_057G1_scaffold_179_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23962..24609)
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGB1_9CLOT
L3_060_057G1_scaffold_179_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24609..25472)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF65_9CLOT
rsgA; ribosome small subunit-dependent GTPase A
L3_060_057G1_scaffold_179_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25612..27843)
DNA (2232bp) protein (744aa)
Putative serine/threonine-protein kinase PrkC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QF53_9CLOT
Putative serine/threonine-protein kinase PrkC {ECO:0000313|EMBL:EKY26629.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
tyrosine kinase family protein
L3_060_057G1_scaffold_179_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27846..28562)
DNA (717bp) protein (239aa)
stp; serine/threonine phosphatase stp (EC:3.1.3.16)
Putative serine/threonine phosphatase stp n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG14_9CLOT
Putative serine/threonine phosphatase stp {ECO:0000313|EMBL:EKY26630.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_060_057G1_scaffold_179_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28577..29608)
DNA (1032bp) protein (344aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFA1_9CLOT
rlmN; 23S rRNA methyltransferase
Displaying items 1-30 of 73 in total

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