ggKbase home page

L3_060_057G1_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_188_1
unknown

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)

This feature has no annotations

L3_060_057G1_scaffold_188_2
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

702..1655
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003483BC8
Cutinase {ECO:0000313|EMBL:EYT53715.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
cutinase
L3_060_057G1_scaffold_188_3
unknown

Not on your lists

2058..2177
DNA (120bp) protein (40aa)

This feature has no annotations

L3_060_057G1_scaffold_188_4
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2303..3559)
DNA (1257bp) protein (419aa)
PF04480 family protein n=1 Tax=Actinomyces sp. ICM47 RepID=J1LQ78_9ACTO
PF04480 family protein {ECO:0000313|EMBL:EJG15737.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
L3_060_057G1_scaffold_188_5
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4816..5190
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B52698
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
30S ribosomal protein S12
L3_060_057G1_scaffold_188_6
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5190..5660
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X553_9ACTO
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
30S ribosomal protein S7
L3_060_057G1_scaffold_188_7
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5810..7933
DNA (2124bp) protein (708aa)
Elongation factor G n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PIS3_9ACTO
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
fusA; elongation factor EF2
L3_060_057G1_scaffold_188_8
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8283..9473
DNA (1191bp) protein (397aa)
elongation factor Tu (EC:2.7.7.4)
Elongation factor Tu n=2 Tax=Actinomyces RepID=E8JHG3_9ACTO
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
L3_060_057G1_scaffold_188_9
unknown

Not on your lists

9600..9833
DNA (234bp) protein (78aa)

This feature has no annotations

L3_060_057G1_scaffold_188_10
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11341..11649
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=3 Tax=Actinomyces RepID=E8JHG2_9ACTO
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 877 str. F0543.;"
30S ribosomal protein S10
L3_060_057G1_scaffold_188_11
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11661..12329
DNA (669bp) protein (223aa)
50S ribosomal protein L3 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X546_9ACTO
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
rplC; 50S ribosomal protein L3
L3_060_057G1_scaffold_188_12
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12331..12987
DNA (657bp) protein (219aa)
50S ribosomal protein L4 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHZ7_9ACTO
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
50S ribosomal protein L4P
L3_060_057G1_scaffold_188_13
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12984..13289
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B3495A
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
ribosomal protein L25/L23
L3_060_057G1_scaffold_188_14
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13317..14153
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQK9_9ACTO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
rplB; 50S ribosomal protein L2
L3_060_057G1_scaffold_188_15
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14169..14450
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X645_9ACTO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
30S ribosomal protein S19
L3_060_057G1_scaffold_188_16
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


14482..14853
DNA (372bp) protein (124aa)
50S ribosomal protein L22 n=7 Tax=Actinobacteria RepID=A7B9N9_9ACTO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
50S ribosomal protein L22
L3_060_057G1_scaffold_188_17
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14853..15701
DNA (849bp) protein (283aa)
30S ribosomal protein S3 n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B72B29
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
30S ribosomal protein S3
L3_060_057G1_scaffold_188_18
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15707..16126
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Actinomyces sp. ICM47 RepID=J1LMB3_9ACTO
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
rplP; 50S ribosomal protein L16
L3_060_057G1_scaffold_188_19
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16126..16359
DNA (234bp) protein (78aa)
50S ribosomal protein L29 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PI94_9ACTO
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
rpmC; 50S ribosomal protein L29
L3_060_057G1_scaffold_188_20
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16365..16643
DNA (279bp) protein (93aa)
30S ribosomal protein S17 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PIX4_9ACTO
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
30S ribosomal protein S17
L3_060_057G1_scaffold_188_21
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


16736..17104
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=7 Tax=Actinobacteria RepID=A7B9N4_9ACTO
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
rplN; 50S ribosomal protein L14
L3_060_057G1_scaffold_188_22
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17104..17538
DNA (435bp) protein (145aa)
50S ribosomal protein L24 n=2 Tax=Actinomyces RepID=E8JHF0_9ACTO
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 877 str. F0543.;"
50S ribosomal protein L24P
L3_060_057G1_scaffold_188_23
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17541..18086
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X636_9ACTO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
50S ribosomal protein L5
L3_060_057G1_scaffold_188_24
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18089..18274
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X534_9ACTO
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
rpsN; 30S ribosomal protein S14
L3_060_057G1_scaffold_188_25
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18339..18737
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B2F3BC
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georgiae F0490.;"
rpsH; 30S ribosomal protein S8
L3_060_057G1_scaffold_188_26
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18753..19289
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PI18_9ACTO
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
50S ribosomal protein L6P
L3_060_057G1_scaffold_188_27
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19289..19660
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZU94_9ACTO
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
50S ribosomal protein L18
L3_060_057G1_scaffold_188_28
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19690..20391
DNA (702bp) protein (234aa)
30S ribosomal protein S5 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X632_9ACTO
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
rpsE; 30S ribosomal protein S5
L3_060_057G1_scaffold_188_29
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20391..20573
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PIB1_9ACTO
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
rpmD; 50S ribosomal protein L30
L3_060_057G1_scaffold_188_30
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20576..21061
DNA (486bp) protein (162aa)
50S ribosomal protein L15 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PIY4_9ACTO
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
Displaying items 1-30 of 76 in total

View Taxonomy