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L3_060_057G1_scaffold_190

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_190_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(264..728)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UZK9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES49147.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_060_057G1_scaffold_190_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

835..1374
DNA (540bp) protein (180aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI26_9CLOT
Putative sporulation protein YyaC {ECO:0000313|EMBL:EKY27674.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sporulation protein YyaC
L3_060_057G1_scaffold_190_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1430..2464)
DNA (1035bp) protein (345aa)
Mbl protein n=2 Tax=Clostridium botulinum B RepID=B2TK07_CLOBB
rod shape-determining protein Mbl
Cell shape determining, MreB/Mrl family protein {ECO:0000313|EMBL:AIY79804.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_060_057G1_scaffold_190_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2550..2804)
DNA (255bp) protein (85aa)
Stage III sporulation protein D n=2 Tax=Clostridium botulinum B RepID=B2TK06_CLOBB
spoIIID; sporulation transcriptional regulator spoiiid
Stage III sporulation protein D {ECO:0000313|EMBL:ACD22135.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_060_057G1_scaffold_190_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2903..3607)
DNA (705bp) protein (235aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLZ7_CLOSA
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AGX41543.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_060_057G1_scaffold_190_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3756..4799)
DNA (1044bp) protein (348aa)
Stage II sporulation protein D n=2 Tax=Clostridium butyricum RepID=B1R2J8_CLOBU
Stage II sporulation protein D (SpoIID) {ECO:0000313|EMBL:KJZ84945.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sporulation stage II protein D
L3_060_057G1_scaffold_190_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4981..6234)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPH5_9CLOT
L3_060_057G1_scaffold_190_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6256..6897)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETS1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDG02650.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L3_060_057G1_scaffold_190_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7044..7451)
DNA (408bp) protein (136aa)
ATP synthase epsilon chain n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML69_CLOSA
atpC; ATP synthase epsilon chain
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_060_057G1_scaffold_190_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7465..8856)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=4 Tax=Clostridium butyricum RepID=B1R2J4_CLOBU
L3_060_057G1_scaffold_190_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8873..9724)
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Clostridium botulinum E RepID=ATPG_CLOBA
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_060_057G1_scaffold_190_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9762..11276)
DNA (1515bp) protein (505aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGM7_9CLOT
L3_060_057G1_scaffold_190_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11287..11826)
DNA (540bp) protein (180aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=4 Tax=Clostridium botulinum RepID=ATPD_CLOBA
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416, ECO:0000313|EMBL:CDH89432.1}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_060_057G1_scaffold_190_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11829..12308)
DNA (480bp) protein (160aa)
atpF; F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URT8_CLOBO
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_060_057G1_scaffold_190_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12356..12574)
DNA (219bp) protein (73aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.14)
F0F1 ATP synthase subunit C n=1 Tax=Clostridium botulinum RepID=UPI000309D3E0
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_060_057G1_scaffold_190_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12602..13285)
DNA (684bp) protein (228aa)
atpB; F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZJ4_CLOBA
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_060_057G1_scaffold_190_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13287..13643)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BW10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR21314.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_060_057G1_scaffold_190_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14232..15413)
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ETD69108.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ETD69108.1};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
thlA; acetyl-CoA acetyltransferase ThlA (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FZJ0_CLOPA
L3_060_057G1_scaffold_190_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15531..16679)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EHI97450.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EHI97450.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
wecB; UDP-N-acetylglucosamine 2-epimerase WecB (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBC3_9CLOT
L3_060_057G1_scaffold_190_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16704..17198)
DNA (495bp) protein (165aa)
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML60_CLOSA
CMP/dCMP deaminase, zinc-binding protein
CMP/dCMP deaminase, zinc-binding protein {ECO:0000313|EMBL:AGX41529.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_060_057G1_scaffold_190_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17463..18092)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8R0_9CLOT
L3_060_057G1_scaffold_190_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18109..18558)
DNA (450bp) protein (150aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS00_9CLOT
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KJU73135.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_060_057G1_scaffold_190_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18619..19053)
DNA (435bp) protein (145aa)
Protein-tyrosine-phosphatase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K108_CLOPA
Protein tyrosine phosphatase {ECO:0000313|EMBL:KJU73134.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
low molecular weight phosphotyrosine phosphatase family protein
L3_060_057G1_scaffold_190_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19066..20178)
DNA (1113bp) protein (371aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI49_9CLOT
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
L3_060_057G1_scaffold_190_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20133..20738)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLQ9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41525.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_060_057G1_scaffold_190_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20778..21860)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4B0_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
prfA; peptide chain release factor 1
L3_060_057G1_scaffold_190_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21917..23713)
DNA (1797bp) protein (599aa)
Putative Modification methylase, HemK family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FC75_9CLOT
Putative Modification methylase, HemK family {ECO:0000313|EMBL:CDG02668.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
HemK family modification methylase
L3_060_057G1_scaffold_190_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23726..24316)
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Thymidine kinase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS03_9CLOT
thymidine kinase family protein
L3_060_057G1_scaffold_190_29
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24491..24703
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=1 Tax=Clostridium colicanis 209318 RepID=N9WDB1_9CLOT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rpmE; 50S ribosomal protein L31
L3_060_057G1_scaffold_190_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24837..25940
DNA (1104bp) protein (368aa)
Monogalactosyldiacylglycerol synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BY86_9CLOT
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIY82736.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 74 in total

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