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L3_060_057G1_scaffold_194

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Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_194_1

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2..646
DNA (645bp) protein (215aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SAD6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC52389.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_060_057G1_scaffold_194_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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661..2250
DNA (1590bp) protein (530aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUR1_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDO60711.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative recombinase
L3_060_057G1_scaffold_194_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2304..2801
DNA (498bp) protein (166aa)
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQB0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB75118.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Helix-turn-helix.
L3_060_057G1_scaffold_194_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3148..4551
DNA (1404bp) protein (468aa)
Serine/threonine transporter SstT n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1A3_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Na+/serine symporter
L3_060_057G1_scaffold_194_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5076..5855
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76802.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_060_057G1_scaffold_194_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6028..7071
DNA (1044bp) protein (348aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB75767.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative ABC transporter ATP-binding protein
L3_060_057G1_scaffold_194_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7055..7918
DNA (864bp) protein (288aa)
ABC-2 type transporter n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI1_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EFB75766.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_060_057G1_scaffold_194_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7932..9356
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75765.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type uncharacterized transport system.
L3_060_057G1_scaffold_194_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9366..10376
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75764.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_060_057G1_scaffold_194_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10683..11858
DNA (1176bp) protein (392aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH8_9FIRM
family 3 glycosyl hydrolase
L3_060_057G1_scaffold_194_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11912..12964
DNA (1053bp) protein (351aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB75762.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75762.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH7_9FIRM
group 1 glycosyl transferase
L3_060_057G1_scaffold_194_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13008..14534)
DNA (1527bp) protein (509aa)
Mg chelatase-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH6_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:EFB75761.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Mg chelatase-related protein
L3_060_057G1_scaffold_194_13
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14547..15356)
DNA (810bp) protein (270aa)
VanW family protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H568_9FIRM
VanW family protein {ECO:0000313|EMBL:CDE34138.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
van Willebrand factor A
L3_060_057G1_scaffold_194_14
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15366..15893)
DNA (528bp) protein (176aa)
HAD phosphatase family IIIA n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4A7_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CDE34136.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
van Willebrand factor A
L3_060_057G1_scaffold_194_15
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(15886..16563)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0Z6V5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83130.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
methylglyoxal synthase
L3_060_057G1_scaffold_194_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16756..18462
DNA (1707bp) protein (569aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH5_9FIRM
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EFB75760.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_060_057G1_scaffold_194_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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18895..20886
DNA (1992bp) protein (664aa)
Peptidase, M56 family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YST9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38416.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
antirepressor regulating drug resistance protein
L3_060_057G1_scaffold_194_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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20901..21284
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38417.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative transcriptional regulator
L3_060_057G1_scaffold_194_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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21395..22261
DNA (867bp) protein (289aa)
PHP domain protein {ECO:0000313|EMBL:EFB76772.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFB76772.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PHP domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB4_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
L3_060_057G1_scaffold_194_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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22275..22532
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76771.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_060_057G1_scaffold_194_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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22661..24439
DNA (1779bp) protein (593aa)
FkbH domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB2_9FIRM
FkbH domain protein {ECO:0000313|EMBL:EFB76770.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
L3_060_057G1_scaffold_194_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24455..25567
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76769.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_060_057G1_scaffold_194_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25583..26947
DNA (1365bp) protein (455aa)
algI; alginate biosynthesis protein AlgI (EC:2.3.1.-)
MBOAT family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB0_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EFB76768.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_060_057G1_scaffold_194_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27102..28061)
DNA (960bp) protein (320aa)
DNA replication protein DnaC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:EFB76317.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA replication protein
L3_060_057G1_scaffold_194_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28065..28970)
DNA (906bp) protein (302aa)
DnaD domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL8_9FIRM
DnaD domain protein {ECO:0000313|EMBL:EFB76316.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Replication initiation and membrane attachment protein (DnaB).
L3_060_057G1_scaffold_194_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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29155..29793
DNA (639bp) protein (213aa)
Phosphoribosyl transferase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL7_9FIRM
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EFB76315.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_060_057G1_scaffold_194_27
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29876..31006
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AU76_EUBCE
Uncharacterized protein {ECO:0000313|EMBL:EIM57349.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
L3_060_057G1_scaffold_194_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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31368..31916
DNA (549bp) protein (183aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EFB75838.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFB75838.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RNA methyltransferase, RsmD family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ3_9FIRM
RNA methyltransferase, RsmD family
L3_060_057G1_scaffold_194_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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31913..32386
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75837.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_060_057G1_scaffold_194_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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32797..33213
DNA (417bp) protein (139aa)
Protein MraZ n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ0_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
mraZ protein
Displaying items 1-30 of 102 in total

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