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L3_060_057G1_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_227_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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343..951
DNA (609bp) protein (203aa)
50S ribosomal protein L25 n=6 Tax=Clostridium perfringens RepID=RL25_CLOPE
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_060_057G1_scaffold_227_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1107..2834
DNA (1728bp) protein (576aa)
Phosphoglucomutase/phosphomannomutase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BT37_CLOPF
Phosphoglucomutase/phosphomannomutase family protein {ECO:0000313|EMBL:EDT15122.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
manB; phosphomannomutase
L3_060_057G1_scaffold_227_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3126..4223
DNA (1098bp) protein (366aa)
TPR domain-containing protein n=5 Tax=Clostridium perfringens RepID=H7CXR6_CLOPF
hypothetical protein
TPR domain-containing protein {ECO:0000313|EMBL:EIA16721.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4239..4955
DNA (717bp) protein (239aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.-)
WecB/TagA/CpsF family glycosyl transferase n=2 Tax=Clostridium perfringens RepID=H7CXR5_CLOPF
WecB/TagA/CpsF family glycosyl transferase {ECO:0000313|EMBL:EIA16720.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4955..6241
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSK4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80448.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_057G1_scaffold_227_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6270..6905
DNA (636bp) protein (212aa)
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKG5_CLOPF
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:EDT25561.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
methenyltetrahydrofolate cyclohydrolase
L3_060_057G1_scaffold_227_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7084..7881)
DNA (798bp) protein (266aa)
pdaA; delta-lactam-biosynthetic de-N-acetylase (EC:3.5.-.-)
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:EDT25551.1}; EC=3.5.-.- {ECO:0000313|EMBL:EDT25551.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP90_CLOP1
L3_060_057G1_scaffold_227_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8040..9137
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=10 Tax=Clostridium perfringens RepID=H7CXR1_CLOPF
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_057G1_scaffold_227_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9685..10617
DNA (933bp) protein (311aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal RNA small subunit methyltransferase H n=9 Tax=Clostridium perfringens RepID=RSMH_CLOP1
L3_060_057G1_scaffold_227_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10689..11117
DNA (429bp) protein (143aa)
Cell division protein FtsL n=6 Tax=Clostridium perfringens RepID=H7CXQ9_CLOPF
cell division protein FtsL
Putative cell division protein FtsL {ECO:0000313|EMBL:EDT15067.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_227_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11305..13524
DNA (2220bp) protein (740aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP94_CLOP1
spoVD; stage V sporulation protein D
Stage V sporulation protein D {ECO:0000313|EMBL:EDS80387.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_057G1_scaffold_227_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13619..15073
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKF9_CLOPF
L3_060_057G1_scaffold_227_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15086..16447
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ00_CLOPF
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
L3_060_057G1_scaffold_227_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16497..17468
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Clostridium perfringens RepID=MRAY_CLOP1
L3_060_057G1_scaffold_227_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17496..18620
DNA (1125bp) protein (375aa)
Stage V sporulation protein E n=8 Tax=Clostridium perfringens RepID=H7CXQ4_CLOPF
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18778..19524
DNA (747bp) protein (249aa)
Cell division protein FtsQ n=6 Tax=Clostridium perfringens RepID=H7CXQ3_CLOPF
cell division protein FtsQ
Cell division protein FtsQ {ECO:0000313|EMBL:EIA16708.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19538..20254
DNA (717bp) protein (239aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXQ2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20267..20605
DNA (339bp) protein (113aa)
Small basic protein n=10 Tax=Clostridium perfringens RepID=H7CXQ0_CLOPF
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT23339.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_227_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20618..21349
DNA (732bp) protein (244aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15079.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_227_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21449..22108
DNA (660bp) protein (220aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_227_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22127..22576
DNA (450bp) protein (150aa)
Cell division protein SepF n=10 Tax=Clostridium perfringens RepID=SEPF_CLOP1
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22578..23339
DNA (762bp) protein (254aa)
S4 domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CXP6_CLOPF
S4 domain-containing protein
S4 domain-containing protein {ECO:0000313|EMBL:EIA16701.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23352..23978
DNA (627bp) protein (209aa)
Cell-division initiation protein DivIVA n=8 Tax=Clostridium perfringens RepID=H7CXP5_CLOPF
cell division protein DivIVA
Cell-division initiation protein DivIVA {ECO:0000313|EMBL:EIA16700.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24116..25036
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Pseudouridine synthase n=6 Tax=Clostridium perfringens RepID=H7CXP4_CLOPF
hypothetical protein
L3_060_057G1_scaffold_227_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25040..25576
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=11 Tax=Clostridium perfringens RepID=PYRR_CLOP1
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_227_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25596..26723
DNA (1128bp) protein (376aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XJB3_CLOPE
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81554.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_057G1_scaffold_227_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26834..28561)
DNA (1728bp) protein (576aa)
Fibronectin-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8W3_CLOPF
Fibronectin-binding protein {ECO:0000313|EMBL:EDT23333.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
fibronectin-binding protein
L3_060_057G1_scaffold_227_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28653..29471
DNA (819bp) protein (273aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Diaminopimelate epimerase n=4 Tax=Clostridium perfringens RepID=H7CXP0_CLOPF
L3_060_057G1_scaffold_227_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29488..30519
DNA (1032bp) protein (344aa)
Putative lipoprotein n=2 Tax=Clostridium perfringens RepID=Q0TPB2_CLOP1
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT23275.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_227_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30618..32006
DNA (1389bp) protein (463aa)
Putative pilus biogenesis protein n=2 Tax=Clostridium perfringens RepID=Q0TPB3_CLOP1
pilus biogenesis protein
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT23281.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 69 in total

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