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L3_060_057G1_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_256_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(423..1151)
DNA (729bp) protein (243aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Probable beta-hexosamidase A n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNR6_CLOPE
beta-hexosamidase A
L3_060_057G1_scaffold_256_2
unknown

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comp(1180..1341)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_060_057G1_scaffold_256_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1534..2211
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Uracil-DNA glycosylase n=6 Tax=Clostridium perfringens RepID=H7CS60_CLOPF
uracil-DNA glycosylase
L3_060_057G1_scaffold_256_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2419..2715
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R8C2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23570.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_057G1_scaffold_256_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2933..4246
DNA (1314bp) protein (438aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUH2_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT23566.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_256_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4367..4579)
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS57_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18546.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_060_057G1_scaffold_256_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4943..5566)
DNA (624bp) protein (208aa)
CutC family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUJ8_CLOPF
CutC family protein {ECO:0000313|EMBL:EDT14659.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
CutC family protein
L3_060_057G1_scaffold_256_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5563..6699)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XNS2_CLOPE
mechanosensitive ion channel protein MscS
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT14649.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_256_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6883..7389)
DNA (507bp) protein (169aa)
CarD family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CS54_CLOPF
CarD family transcriptional regulator {ECO:0000313|EMBL:EIA18543.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
CarD family transcriptional regulator
L3_060_057G1_scaffold_256_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7684..8415
DNA (732bp) protein (244aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
NAD-dependent protein deacetylase n=2 Tax=Clostridium perfringens RepID=Q0TUH9_CLOP1
NAD-dependent deacetylase
L3_060_057G1_scaffold_256_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8552..8866
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CS52_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT26615.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_060_057G1_scaffold_256_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8951..9199)
DNA (249bp) protein (83aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CS51_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86734.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_060_057G1_scaffold_256_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9212..9415)
DNA (204bp) protein (68aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79959.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_057G1_scaffold_256_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9535..9981
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CS49_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18538.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_060_057G1_scaffold_256_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10054..11376)
DNA (1323bp) protein (441aa)
Phosphoserine phosphatase n=1 Tax=Clostridium perfringens F262 RepID=H7CS48_CLOPF
lipoprotein
Phosphoserine phosphatase {ECO:0000313|EMBL:EIA18537.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_256_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11692..12465)
DNA (774bp) protein (258aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHC5_CLOPF
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS80854.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
capsular polysaccharide biosynthesis protein
L3_060_057G1_scaffold_256_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12737..13471)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CS46_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18535.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_060_057G1_scaffold_256_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13489..15216)
DNA (1728bp) protein (576aa)
DnaK family protein n=4 Tax=Clostridium perfringens RepID=Q0TUI7_CLOP1
molecular chaperone DnaK
DnaK family protein {ECO:0000313|EMBL:EDT23526.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_256_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15204..15806)
DNA (603bp) protein (201aa)
Putative co-chaperone GrpE n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2I8_CLOPF
Putative co-chaperone GrpE {ECO:0000313|EMBL:EDT71961.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
co-chaperone GrpE
L3_060_057G1_scaffold_256_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15824..17092)
DNA (1269bp) protein (423aa)
DnaJ domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2I7_CLOPF
DnaJ domain protein {ECO:0000313|EMBL:EDT71970.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
dnaJ domain-containing protein
L3_060_057G1_scaffold_256_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17346..19673
DNA (2328bp) protein (776aa)
GGDEF/EAL domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CS42_CLOPF
GGDEF/EAL domain-containing protein {ECO:0000313|EMBL:EIA18531.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
diguanylate cyclase
L3_060_057G1_scaffold_256_22
unknown

Not on your lists

comp(19772..19891)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_060_057G1_scaffold_256_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19938..20258
DNA (321bp) protein (107aa)
Immunity protein n=4 Tax=Clostridium perfringens RepID=H7CS41_CLOPF
Immunity protein {ECO:0000313|EMBL:EIA18530.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
immunity protein
L3_060_057G1_scaffold_256_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20546..21181
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase, subfamily IB n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH89_CLOPF
HAD-superfamily hydrolase, subfamily IB {ECO:0000313|EMBL:EDS80833.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
HAD family hydrolase
L3_060_057G1_scaffold_256_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21191..21529
DNA (339bp) protein (113aa)
Putative membrane protein n=7 Tax=Clostridium perfringens RepID=Q0TUJ2_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81644.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_057G1_scaffold_256_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21522..21854
DNA (333bp) protein (111aa)
Putative membrane protein n=3 Tax=Clostridium perfringens RepID=Q0TUJ3_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT14660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_256_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21999..23477
DNA (1479bp) protein (493aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H1CWH9_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT26644.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_060_057G1_scaffold_256_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23470..24345
DNA (876bp) protein (292aa)
Prenyltransferase, UbiA family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R883_CLOPF
Prenyltransferase, UbiA family {ECO:0000313|EMBL:EDT23546.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
L3_060_057G1_scaffold_256_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24402..25094)
DNA (693bp) protein (231aa)
Conserved domain protein n=4 Tax=Clostridium perfringens RepID=Q0TUJ6_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79947.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_057G1_scaffold_256_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25097..26527)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUJ7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18522.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 56 in total

View Taxonomy