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L3_060_057G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_260_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..844
DNA (843bp) protein (281aa)
Actinobacterial surface-anchored domain protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CUA7_CLOSO
ChW repeat-containing protein {ECO:0000313|EMBL:CEP46126.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
putative peptidoglycan linked protein
L3_060_057G1_scaffold_260_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1348..1593)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0D6I2_CLOSO
Domain of uncharacterised function (DUF1413) {ECO:0000313|EMBL:CEP46153.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK36645.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_260_3
unknown

Not on your lists

comp(1608..1727)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_060_057G1_scaffold_260_4
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2650..2865)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:ETT32272.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
L3_060_057G1_scaffold_260_5
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2925..4481)
DNA (1557bp) protein (519aa)
CLI_3235-class bacteriocin maturation radical SAM enzyme n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SWT1_CLOSG
Radical SAM domain-containing protein {ECO:0000313|EMBL:ETT32273.1}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
Radical SAM domain-containing protein
L3_060_057G1_scaffold_260_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4641..6329
DNA (1689bp) protein (563aa)
Uncharacterized protein n=4 Tax=Enterococcus faecalis RepID=R3D364_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EOL94016.1}; TaxID=1169281 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0366.;"
Hypothetical protein
L3_060_057G1_scaffold_260_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6472..7338
DNA (867bp) protein (289aa)
multidrug family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH15446.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH15446.1};; ABC-type transport system, multidrug-familyATP-binding protein {ECO:0000313|EMBL:CEJ98462.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEJ98462.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC transporter family protein n=35 Tax=Clostridium difficile RepID=T3GLN2_CLODC
L3_060_057G1_scaffold_260_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7354..8613
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L119_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13309.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_060_057G1_scaffold_260_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8974..10038)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CQZ0_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEO29344.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_260_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10259..10681)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CRV8_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEO29347.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_260_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10808..11206)
DNA (399bp) protein (133aa)
YcxB-like family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E076_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEO29350.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_260_12
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11517..13631)
DNA (2115bp) protein (705aa)
YkuG n=2 Tax=Bacillus amyloliquefaciens RepID=A7Z208_BACA2
ykuG; hypothetical protein
YkuG {ECO:0000313|EMBL:ABS73034.1}; TaxID=326423 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens subsp. plantarum (strain DSM 23117 / BGSC; 10A6 / FZB42).;"
L3_060_057G1_scaffold_260_13
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13704..13931)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VB13_CLOBI
Bacteriocin {ECO:0000313|EMBL:KGJ47969.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
uviB; bacteriocin UviB
L3_060_057G1_scaffold_260_14
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14016..14672
DNA (657bp) protein (219aa)
RNA polymerase sigma factor, sigma-70 family protein n=2 Tax=Clostridium sordellii RepID=T0D3F1_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KGJ47978.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
RNA polymerase sigma factor, sigma-70 family protein
L3_060_057G1_scaffold_260_15
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14928..15428)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ47976.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_060_057G1_scaffold_260_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16314..17312)
DNA (999bp) protein (333aa)
Anaerobic sulfite reductase subunit C {ECO:0000313|EMBL:CEN22488.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CEN22488.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Sulfite reductase, subunit C n=1 Tax=Clostridium colicanis 209318 RepID=N9XUY3_9CLOT
sulfite reductase subunit C
L3_060_057G1_scaffold_260_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17328..18371)
DNA (1044bp) protein (348aa)
Sulfite reductase subunit A {ECO:0000313|EMBL:CEP46160.1}; EC=1.8.-.- {ECO:0000313|EMBL:CEP46160.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Putative sulfite reductase, subunit A n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0EEH6_CLOSO
asrA; sulfite reductase, subunit A
L3_060_057G1_scaffold_260_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18595..20331
DNA (1737bp) protein (579aa)
Iron hydrogenase {ECO:0000313|EMBL:CEP46164.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CEP46164.1};; Iron hydrogenase,Iron hydrogenase 1,bidirectional hydrogenase complex protein HoxU,Iron only hydrogenase large subunit, C-terminal domain,[FeFe] hydrogenase, group A,Iron only hydrogenase large subunit... {ECO:0000313|EMBL:CEK36642.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hydA; iron hydrogenase (EC:1.12.7.2)
Putative Iron hydrogenase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F281_9CLOT
L3_060_057G1_scaffold_260_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20369..20797)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5P6_9CLOT
Uncharacterised protein {ECO:0000313|EMBL:CEP46169.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK32688.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_260_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20971..21144
DNA (174bp) protein (58aa)
Putative membrane protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CWU6_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:CEK36640.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_260_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21250..22146)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036596CB
Cell surface peptidase, M4 family,Predicted small secreted protein,Peptidase propeptide and YPEB domain {ECO:0000313|EMBL:CEK36639.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
ykoJ; hypothetical protein
L3_060_057G1_scaffold_260_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22183..22347)
DNA (165bp) protein (55aa)
Spo0E like sporulation regulatory family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0D6M2_CLOSO
Spo0E like sporulation regulatory protein {ECO:0000313|EMBL:CEK36638.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_260_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23037..23450
DNA (414bp) protein (138aa)
Universal stress family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CWU0_CLOSO
Universal stress protein {ECO:0000313|EMBL:CEP45918.1}; Universal stress protein,Universal stress protein family {ECO:0000313|EMBL:CEK36637.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
UspA domain-containing protein
L3_060_057G1_scaffold_260_24
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23690..24412)
DNA (723bp) protein (241aa)
Putative nitrite/sulfite reductase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTP0_CLOPF
Nitrite/sulfite reductase,ferredoxin-nitrite reductase,Sulfite reductase, beta subunit (Hemoprotein),nitrite reductase [NAD(P)H], large subunit,Nitrite and sulphite reductase 4Fe-4S domain {ECO:0000313|EMBL:CEK36636.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
nitrite/sulfite reductase
L3_060_057G1_scaffold_260_25
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24866..25429)
DNA (564bp) protein (188aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D426_CLOSO
Transposon Tn21 resolvase {ECO:0000313|EMBL:CEP45922.1}; Transposon Tn21 resolvase,DNA-invertase hin,multiple promoter invertase,Resolvase, N terminal domain {ECO:0000313|EMBL:CEK36635.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
transposon Tn21 resolvase
L3_060_057G1_scaffold_260_26
unknown

Not on your lists

25612..25779
DNA (168bp) protein (56aa)

This feature has no annotations

L3_060_057G1_scaffold_260_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25943..26137
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Clostridium sordellii RepID=T0D5Y2_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:CEK32673.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_260_28
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26177..26800
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0D5Z3_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:CEK32674.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_260_29
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27224..28093)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VFR8_CLOBI
Membrane associated lipoprotein {ECO:0000313|EMBL:CEK32676.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_260_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28253..28456)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:CEK32677.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Displaying items 1-30 of 65 in total

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