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L3_060_057G1_scaffold_272

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_272_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(274..1617)
DNA (1344bp) protein (448aa)
High-affinity gluconate transporter n=854 Tax=Enterobacteriaceae RepID=GNTP_ECO57
fructuronate transporter
High-affinity gluconate transporter {ECO:0000313|EMBL:KDZ36712.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L3_060_057G1_scaffold_272_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1957..3141
DNA (1185bp) protein (395aa)
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
Mannonate dehydratase n=437 Tax=Escherichia RepID=UXUA_ECO27
L3_060_057G1_scaffold_272_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3222..4682
DNA (1461bp) protein (487aa)
D-mannonate oxidoreductase n=5 Tax=Escherichia coli RepID=L3F8Z4_ECOLX
D-mannonate oxidoreductase {ECO:0000313|EMBL:ESK00052.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
uxuB; fructuronate reductase
L3_060_057G1_scaffold_272_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4704..4898)
DNA (195bp) protein (65aa)
Uncharacterized protein n=122 Tax=Escherichia RepID=B3IN70_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX33706.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L3_060_057G1_scaffold_272_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4945..5670
DNA (726bp) protein (242aa)
Transcriptional regulator n=67 Tax=Escherichia RepID=H9V0C6_ECOLX
uxuR; Uxu operon transcriptional regulator
DNA-binding transcriptional repressor {ECO:0000313|EMBL:ESK00050.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L3_060_057G1_scaffold_272_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5811..6641)
DNA (831bp) protein (277aa)
Uncharacterized protein n=82 Tax=Escherichia coli RepID=H9V0C7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU33794.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_060_057G1_scaffold_272_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7315..7707
DNA (393bp) protein (131aa)
Anti-adapter protein IraD n=123 Tax=Escherichia RepID=IRAD_ECO45
yjiD; Anti-adapter protein iraD
Anti-adapter protein IraD {ECO:0000256|HAMAP-Rule:MF_02010}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_060_057G1_scaffold_272_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7700..8611)
DNA (912bp) protein (304aa)
HTH-type transcriptional regulator QseD n=4 Tax=Escherichia coli RepID=T7UE46_ECOLX
HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KEN94710.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
Putative transcriptional regulator protein
L3_060_057G1_scaffold_272_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8676..9848)
DNA (1173bp) protein (391aa)
iadA; isoaspartyl dipeptidase (EC:3.4.19.5)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Isoaspartyl dipeptidase n=146 Tax=Enterobacteriaceae RepID=A8A855_ECOHS
L3_060_057G1_scaffold_272_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9861..10322)
DNA (462bp) protein (154aa)
Inner membrane protein YjiG n=1189 Tax=Enterobacteriaceae RepID=YJIG_ECO57
nucleoside recognition domain-containing protein
Inner membrane protein yjiG {ECO:0000313|EMBL:ELE06276.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_060_057G1_scaffold_272_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10319..11002)
DNA (684bp) protein (228aa)
Uncharacterized protein YjiH n=1020 Tax=Enterobacteriaceae RepID=YJIH_ECOLI
nucleoside recognition domain protein
Inner membrane protein {ECO:0000313|EMBL:EOU96457.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_060_057G1_scaffold_272_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11252..11806
DNA (555bp) protein (185aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
Probable RNA 2'-phosphotransferase n=1 Tax=Escherichia coli O104:H4 str. C227-11 RepID=F9HUF8_ECOLX
RNA 2'-phosphotransferase
L3_060_057G1_scaffold_272_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11819..12997)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=H9V0D3_ECOLX
hypothetical protein
Major facilitator superfamily transporter {ECO:0000313|EMBL:EOW11781.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
L3_060_057G1_scaffold_272_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13065..13673)
DNA (609bp) protein (203aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=M8QLJ3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK49714.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L3_060_057G1_scaffold_272_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13989..14246)
DNA (258bp) protein (86aa)
Uncharacterized protein n=255 Tax=Enterobacteriaceae RepID=J7QBH0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYV08557.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L3_060_057G1_scaffold_272_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14243..15010)
DNA (768bp) protein (256aa)
2-hydroxyglutaryl-CoA dehydratase component A n=34 Tax=Escherichia coli RepID=B2N0I0_ECOLX
activator of (R)-2-hydroxyglutaryl-CoA dehydratase
Predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase {ECO:0000313|EMBL:BAI28652.1}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 (strain 11368 / EHEC).;"
L3_060_057G1_scaffold_272_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15020..16171)
DNA (1152bp) protein (384aa)
2-hydroxyglutaryl-CoA dehydratase, component D n=20 Tax=Enterobacteriaceae RepID=B2N0H9_ECOLX
2-hydroxyglutaryl-CoA dehydratase, D-component {ECO:0000313|EMBL:EGJ06810.1}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
yjiM; 2-hydroxyglutaryl-CoA dehydratase
L3_060_057G1_scaffold_272_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16287..17567)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=77 Tax=Escherichia coli RepID=B2N0H5_ECOLX
hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:BAI28654.1}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 (strain 11368 / EHEC).;"
L3_060_057G1_scaffold_272_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17608..18840)
DNA (1233bp) protein (411aa)
Multidrug efflux system protein n=14 Tax=Escherichia coli RepID=B7LXP7_ECO8A
yjiO; multidrug efflux system protein
Multidrug resistance protein MdtM {ECO:0000313|EMBL:ESD18283.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_060_057G1_scaffold_272_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19307..20251
DNA (945bp) protein (315aa)
Transposase n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2QL40_ECOLX
Transposase {ECO:0000313|EMBL:ESK00035.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L3_060_057G1_scaffold_272_21
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20494..21906)
DNA (1413bp) protein (471aa)
Aminotransferase class-i (EC:2.6.1.-)
Transcriptional regulator, GntR family protein n=2 Tax=Shigella dysenteriae RepID=E2XDE2_SHIDY
Putative regulator {ECO:0000313|EMBL:ABB64459.1}; TaxID=300267 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae serotype 1 (strain Sd197).;"
L3_060_057G1_scaffold_272_22
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22083..22247
DNA (165bp) protein (55aa)
Uncharacterized protein n=110 Tax=Enterobacteriaceae RepID=B2N0H1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ28450.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;"
L3_060_057G1_scaffold_272_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22599..25139
DNA (2541bp) protein (847aa)
Penicillin G acylase n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2QGC3_ECOLX
Penicillin G acylase {ECO:0000313|EMBL:ESK00032.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
pac; penicillin G acylase
L3_060_057G1_scaffold_272_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25217..26173)
DNA (957bp) protein (319aa)
GTPase n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2QHH1_ECOLX
GTPase {ECO:0000313|EMBL:ESK00031.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
GTP-binding protein YjiA
L3_060_057G1_scaffold_272_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26184..26387)
DNA (204bp) protein (68aa)
Uncharacterized protein YjiX n=1403 Tax=Enterobacteriaceae RepID=YJIX_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ86351.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_060_057G1_scaffold_272_26
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26437..28587)
DNA (2151bp) protein (717aa)
Carbon starvation family protein n=311 Tax=Enterobacteriaceae RepID=A8A871_ECOHS
Carbon starvation family protein {ECO:0000313|EMBL:EFW58278.1}; TaxID=945360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri CDC 796-83.;"
yjiY; inner membrane protein
L3_060_057G1_scaffold_272_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28980..29492)
DNA (513bp) protein (171aa)
4-hydroxyphenylacetate 3-monooxygenase reductase component n=307 Tax=Enterobacteriaceae RepID=HPAC_ECOLX
4-hydroxyphenylacetate 3-monooxygenase, reductase component
4-hydroxyphenylacetate 3-monooxygenase, reductase component {ECO:0000313|EMBL:KEJ42772.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_060_057G1_scaffold_272_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29510..31072)
DNA (1563bp) protein (521aa)
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component {ECO:0000313|EMBL:EHW26574.1}; EC=1.14.14.9 {ECO:0000313|EMBL:EHW26574.1};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit n=247 Tax=Enterobacteriaceae RepID=J7QK23_ECOLX
hpaB; 4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit
L3_060_057G1_scaffold_272_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31323..32213)
DNA (891bp) protein (297aa)
4-hydroxyphenylacetate catabolism regulatory protein HpaA n=2 Tax=Escherichia coli RepID=H1E0P1_ECOLX
4-hydroxyphenylacetate catabolism regulatory protein HpaA {ECO:0000313|EMBL:ESK00026.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hpaA; Regulator of the 4HPA-hydroxylase operon
L3_060_057G1_scaffold_272_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32223..33599)
DNA (1377bp) protein (459aa)
4-hydroxyphenylacetate permease n=2 Tax=Escherichia coli RepID=H4XDK6_ECOLX
4-hydroxyphenylacetate permease {ECO:0000313|EMBL:ESK00025.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
4-hydroxyphenylacetate transporter
Displaying items 1-30 of 51 in total

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