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L3_060_057G1_scaffold_279

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_279_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..277
DNA (276bp) protein (92aa)
UPF0380 protein yafZ n=3 Tax=Enterobacteriaceae RepID=C1M6X0_9ENTR
hypothetical protein
PF06067 domain protein {ECO:0000313|EMBL:EIH13402.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
L3_060_057G1_scaffold_279_2
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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486..1199
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae UCICRE 8 RepID=V3FYJ0_KLEPN
Transcriptional regulator {ECO:0000313|EMBL:KGY19386.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
putative DNA-binding protein
L3_060_057G1_scaffold_279_3
unknown

Not on your lists

1223..1342
DNA (120bp) protein (40aa)
hypothetical protein
L3_060_057G1_scaffold_279_4
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1491..2357
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VUA1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN86970.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_060_057G1_scaffold_279_5
unknown

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2451..2615
DNA (165bp) protein (55aa)

This feature has no annotations

L3_060_057G1_scaffold_279_6
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2790..3248
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VRU5_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN86971.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_060_057G1_scaffold_279_7
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3258..3476
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQI1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHC11027.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_060_057G1_scaffold_279_8
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3519..3998
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VTX4_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN86973.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_060_057G1_scaffold_279_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4007..4228
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Chester str. ATCC 11997 RepID=V2AJA2_SALET
Uncharacterized protein {ECO:0000313|EMBL:KAK00250.1}; TaxID=1387330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar 9,12:l,v:- str. 94293.;"
hypothetical protein
L3_060_057G1_scaffold_279_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4248..4565
DNA (318bp) protein (106aa)
Antitoxin of the YpjF-YfjZ toxin-antitoxin system n=1 Tax=Escherichia coli KD2 RepID=I4T0A5_ECOLX
Antitoxin YafW {ECO:0000313|EMBL:EWF64341.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
antitoxin
L3_060_057G1_scaffold_279_11
Enterobacter sp. MGH 24, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4586..4954
DNA (369bp) protein (123aa)
Toxin YkfI n=1 Tax=Klebsiella oxytoca MGH 28 RepID=V3Q881_KLEOX
Toxin {ECO:0000313|EMBL:ESN16172.1}; TaxID=1329828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 24.;"
toxin YkfI
L3_060_057G1_scaffold_279_12
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5306..6376)
DNA (1071bp) protein (357aa)
ABC transporter family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6FTB4_SHIFL
ABC transporter family protein {ECO:0000313|EMBL:EIQ59506.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Spermidine/putrescine import ATP-binding protein PotA
L3_060_057G1_scaffold_279_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6369..8138)
DNA (1770bp) protein (590aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6FTB3_SHIFL
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EIQ59505.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
ferric transport system permease fbpB
L3_060_057G1_scaffold_279_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8215..9258)
DNA (1044bp) protein (348aa)
Bacterial extracellular solute-binding family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6FTB2_SHIFL
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EIQ59504.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
family 1 extracellular solute-binding protein
L3_060_057G1_scaffold_279_15
unknown

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comp(9335..9613)
DNA (279bp) protein (93aa)

This feature has no annotations

L3_060_057G1_scaffold_279_16
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9564..10259)
DNA (696bp) protein (232aa)
Transcriptional regulatory protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6FTB1_SHIFL
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
response regulator receiver and unknown domain-containing protein
L3_060_057G1_scaffold_279_17
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10252..11937)
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S9U0_ENTAL
signal transduction histidine kinase regulating citrate/malate metabolism
L3_060_057G1_scaffold_279_18
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12113..12649)
DNA (537bp) protein (179aa)
Tetratricopeptide repeat family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6FTA8_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:CEJ66338.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
tetratricopeptide repeat-containing protein
L3_060_057G1_scaffold_279_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..13902)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SFU5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX65348.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
peptidyl-arginine deiminase
L3_060_057G1_scaffold_279_20
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14300..14869
DNA (570bp) protein (190aa)
Intracellular protease, PfpI family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BDG3_9ENTR
ThiJ/PfpI family protein {ECO:0000313|EMBL:CEJ66337.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
glutamine amidotransferase
L3_060_057G1_scaffold_279_21
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14926..15672)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7D3_9ENTR
Putative methyltransferase {ECO:0000313|EMBL:GAL45259.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
hypothetical protein
L3_060_057G1_scaffold_279_22
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15683..15940)
DNA (258bp) protein (86aa)
UPF0386 protein WEU_00685 n=2 Tax=Citrobacter RepID=R8VHG2_9ENTR
UPF0386 protein WC7_00781 {ECO:0000256|HAMAP-Rule:MF_00827}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
hypothetical protein
L3_060_057G1_scaffold_279_23
unknown

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16989..17156
DNA (168bp) protein (56aa)

This feature has no annotations

L3_060_057G1_scaffold_279_24
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17257..18513
DNA (1257bp) protein (419aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Peptidase T n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7D5_9ENTR
peptidase M20
L3_060_057G1_scaffold_279_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18510..19871
DNA (1362bp) protein (454aa)
Anaerobic C4-dicarboxylate uptake C (DcuC) family transporter n=4 Tax=Citrobacter RepID=G9SFV0_CITFR
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC04610.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
C4-dicarboxylate ABC transporter
L3_060_057G1_scaffold_279_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20178..20807
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M7D7_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY12143.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_060_057G1_scaffold_279_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20907..21143
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SFV2_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX65355.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_060_057G1_scaffold_279_28
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21213..21830)
DNA (618bp) protein (206aa)
LysE type translocator family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H267_SHIFL
LysE type translocator family protein {ECO:0000313|EMBL:EIQ74859.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
lysine transporter LysE
L3_060_057G1_scaffold_279_29
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21937..22845
DNA (909bp) protein (303aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H268_SHIFL
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CEJ66334.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
transcriptional regulator
L3_060_057G1_scaffold_279_30
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22961..23944
DNA (984bp) protein (328aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6H269_SHIFL
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EIQ74861.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
AraC family transcriptional regulator
Displaying items 1-30 of 55 in total

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