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L3_060_057G1_scaffold_291

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_291_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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425..1261
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47757.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
EDD domain protein, DegV family
L3_060_057G1_scaffold_291_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1378..1956
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47758.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
uncharacterized domain HDIG
L3_060_057G1_scaffold_291_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2025..2492)
DNA (468bp) protein (156aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9C9_9FIRM
hypothetical protein
L3_060_057G1_scaffold_291_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2549..2830
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48175.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_057G1_scaffold_291_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2867..3319
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YLE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54813.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_060_057G1_scaffold_291_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3312..3776
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48173.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ifB2; Translation initiation factor IF-2
L3_060_057G1_scaffold_291_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3785..4546)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13807.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_060_057G1_scaffold_291_8
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4580..5728)
DNA (1149bp) protein (383aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YBP9_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ESL13808.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_060_057G1_scaffold_291_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(5725..6894)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XVX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13809.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L3_060_057G1_scaffold_291_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(6951..7958)
DNA (1008bp) protein (336aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RYU6_9FIRM
L3_060_057G1_scaffold_291_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

8193..9572
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFQ1_9FIRM
L3_060_057G1_scaffold_291_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9600..10637
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X954_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48023.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M42
L3_060_057G1_scaffold_291_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10634..11659
DNA (1026bp) protein (342aa)
endoglucanase M (EC:3.2.1.4)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X955_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48024.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_060_057G1_scaffold_291_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11741..12742
DNA (1002bp) protein (334aa)
cellulase (EC:3.2.1.4)
Endoglucanase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X956_9FIRM
Endoglucanase {ECO:0000313|EMBL:EGJ48025.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_060_057G1_scaffold_291_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

12805..14058
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XU99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13244.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ynbB; putative protein YnbB
L3_060_057G1_scaffold_291_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

14114..14818
DNA (705bp) protein (235aa)
Sporulation protein YunB n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCC9_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:ESL13242.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_060_057G1_scaffold_291_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

14840..16813
DNA (1974bp) protein (658aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFP6_9FIRM
L3_060_057G1_scaffold_291_18
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(17045..17773)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein N510_02143 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEX8_9FIRM
Probable transcriptional regulatory protein N510_02143 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_060_057G1_scaffold_291_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18485..20023
DNA (1539bp) protein (513aa)
SSS family solute:Na+ symporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH9_9FIRM
SSS family solute:Na+ symporter {ECO:0000313|EMBL:EGJ45465.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
SSS family transporter
L3_060_057G1_scaffold_291_20
unknown

Not on your lists

comp(20739..21164)
DNA (426bp) protein (142aa)

This feature has no annotations

L3_060_057G1_scaffold_291_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21535..21873
DNA (339bp) protein (113aa)
PF12986 structural domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1G6_9CLOT
PF12986 structural domain protein {ECO:0000313|EMBL:EJF39280.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_060_057G1_scaffold_291_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22032..23621
DNA (1590bp) protein (530aa)
N-acyl-D-aspartate deacylase (EC:3.5.1.83)
D-aminoacylase, C-terminal domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H246_9CLOT
D-aminoacylase, C-terminal domain protein {ECO:0000313|EMBL:EJF39303.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_060_057G1_scaffold_291_23
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23752..25374
DNA (1623bp) protein (541aa)
N-acyl-D-aspartate deacylase (EC:3.5.1.83)
D-aminoacylase, C-terminal domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H246_9CLOT
D-aminoacylase, C-terminal domain protein {ECO:0000313|EMBL:EJF39303.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_060_057G1_scaffold_291_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25453..26784
DNA (1332bp) protein (444aa)
TRAP transporter, DctM-like membrane protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N4F7_9CLOT
TRAP transporter, DctM-like membrane protein {ECO:0000313|EMBL:EJF39312.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
citrate transporter
L3_060_057G1_scaffold_291_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26865..27581)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48079.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
UBA/THIF-type NAD/FAD-binding protein
L3_060_057G1_scaffold_291_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27946..28998
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBU3_9FIRM
L3_060_057G1_scaffold_291_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

29003..30397
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDD3_9FIRM
L3_060_057G1_scaffold_291_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30491..32389
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47823.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative ABC transporter ATP-binding protein
L3_060_057G1_scaffold_291_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32386..33012
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47824.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_057G1_scaffold_291_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33542..34600
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBU7_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
prfA; peptide chain release factor 1
Displaying items 1-30 of 48 in total

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