ggKbase home page

L3_060_057G1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_300_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(220..1761)
DNA (1542bp) protein (514aa)
Putative ATP synthase F0, A subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52642.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
O-antigen polymerase
L3_060_057G1_scaffold_300_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1783..2889)
DNA (1107bp) protein (369aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B842_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52641.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glycosyltransferase
L3_060_057G1_scaffold_300_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3086..3544)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29687.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
acetyltransferase
L3_060_057G1_scaffold_300_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3548..5986)
DNA (2439bp) protein (813aa)
HAD ATPase, P-type, family IC n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52639.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L3_060_057G1_scaffold_300_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6161..6436
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29685.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_300_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6490..7434)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29684.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ROK family protein
L3_060_057G1_scaffold_300_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7510..8583)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50680.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_060_057G1_scaffold_300_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8580..9674)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29682.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
L3_060_057G1_scaffold_300_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9750..10274)
DNA (525bp) protein (175aa)
4'-phosphopantetheinyl transferase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AQ10_9CLOT
4'-phosphopantetheinyl transferase family protein {ECO:0000313|EMBL:ERI67934.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
4'-phosphopantetheinyl transferase
L3_060_057G1_scaffold_300_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10732..11961)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32661.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12108..12809
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32662.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_060_057G1_scaffold_300_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12859..14964
DNA (2106bp) protein (702aa)
Histidine kinase A domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D101_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56666.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15092..15331)
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=3 Tax=Clostridiales RepID=G9YQW0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpsR; 30S ribosomal protein S18
L3_060_057G1_scaffold_300_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15411..15899)
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=3 Tax=Clostridiales RepID=G9YQV9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ssb; single-stranded DNA-binding protein
L3_060_057G1_scaffold_300_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15916..16215)
DNA (300bp) protein (100aa)
30S ribosomal protein S6 n=3 Tax=Clostridiales RepID=G9YQV8_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsF; 30S ribosomal protein S6
L3_060_057G1_scaffold_300_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16444..17247
DNA (804bp) protein (268aa)
Peptidase propeptide and YPEB domain protein n=3 Tax=Clostridiales RepID=G9YQ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32668.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17323..18231)
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=2 Tax=Clostridiales RepID=U2D7I9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32669.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulator
L3_060_057G1_scaffold_300_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18364..19308
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32670.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19327..21318
DNA (1992bp) protein (664aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32671.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21600..22481)
DNA (882bp) protein (294aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Clostridiales RepID=G9YSA6_9FIRM
L3_060_057G1_scaffold_300_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22524..23045)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56657.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23266..24534)
DNA (1269bp) protein (423aa)
Guanine deaminase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56656.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_300_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24855..26234)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56655.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
GumN family protein
L3_060_057G1_scaffold_300_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26443..26691
DNA (249bp) protein (83aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YSA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56654.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
XRE family transcriptional regulator
L3_060_057G1_scaffold_300_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26719..27354
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32677.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_300_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27195..28394)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=G9YS98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32520.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
AAA+-like ATPase
L3_060_057G1_scaffold_300_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28840..29505
DNA (666bp) protein (222aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Clostridiales RepID=U2D386_9CLOT
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:ERI75967.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
soj1; sporulation initiation inhibitor protein Soj
L3_060_057G1_scaffold_300_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29419..29748)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32312.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Mn-dependent transcriptional regulator
L3_060_057G1_scaffold_300_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29770..31107)
DNA (1338bp) protein (446aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=H1CFT9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI81200.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative multi antimicrobial extrusion protein
L3_060_057G1_scaffold_300_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31094..32026)
DNA (933bp) protein (311aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=2 Tax=Clostridiales RepID=U2BSR0_9CLOT
Succinylglutamate desuccinylase/aspartoacylase family protein {ECO:0000313|EMBL:ERI81199.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted deacylase
Displaying items 1-30 of 151 in total

View Taxonomy