ggKbase home page

L3_060_057G1_scaffold_361

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_361_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
Flagellin n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CRE9_CLOSO
Flagellin C {ECO:0000313|EMBL:CEN21535.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_361_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(206..526)
DNA (321bp) protein (107aa)
Flagellar FliT family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0EBH8_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEP50245.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(544..2040)
DNA (1497bp) protein (499aa)
Flagellar hook-associated family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CYM9_CLOSO
Flagellar cap protein {ECO:0000313|EMBL:CEQ18230.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
fliD; flagellar cap protein
L3_060_057G1_scaffold_361_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2052..2435)
DNA (384bp) protein (128aa)
Flagellar protein FliS n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D8G9_CLOSO
Flagellar protein FliS1 {ECO:0000313|EMBL:CEP47841.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
fliS1; flagellar protein FliS
L3_060_057G1_scaffold_361_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2454..2666)
DNA (213bp) protein (71aa)
Carbon storage regulator homolog n=2 Tax=Clostridium sordellii RepID=T0CRF3_CLOSO
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
csrA; carbon storage regulator
L3_060_057G1_scaffold_361_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2667..3047)
DNA (381bp) protein (127aa)
Flagellar assembly factor FliW n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0DZT8_CLOSO
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3063..3995)
DNA (933bp) protein (311aa)
Flagellar hook-associated protein 3 n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0EBI2_CLOSO
Flagellar hook-associated protein FlgL (Or HAP3) {ECO:0000313|EMBL:CEQ28082.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
flgL; flagellar hook-associated protein FlgL
L3_060_057G1_scaffold_361_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4010..5284)
DNA (1275bp) protein (425aa)
Flagellar hook-associated protein FlgK n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CYN2_CLOSO
Flagellar hook-associated protein FlgK (Or HAP1) {ECO:0000313|EMBL:CEQ31528.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
flgK; flagellar hook-associated protein
L3_060_057G1_scaffold_361_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5301..5714)
DNA (414bp) protein (138aa)
FlgN family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D8H3_CLOSO
Flagellar biosynthesis protein {ECO:0000313|EMBL:CEP84925.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
flagellar biosynthesis protein
L3_060_057G1_scaffold_361_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5727..5987)
DNA (261bp) protein (87aa)
Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D8F1_CLOSO
Regulator of flagellin synthesis FlgM {ECO:0000313|EMBL:CEK31642.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
negative regulator of flagellin synthesis
L3_060_057G1_scaffold_361_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6008..6331)
DNA (324bp) protein (108aa)
Surface presentation of antigens family protein n=2 Tax=Clostridium sordellii RepID=T0CRF9_CLOSO
Surface presentation of antigens family protein {ECO:0000313|EMBL:EPZ56672.1}; TaxID=1292036 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] sordellii ATCC 9714.;"
fliN; flagellar motor switch protein
L3_060_057G1_scaffold_361_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6353..6778)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0EBI7_CLOSO
Protein of uncharacterised function (DUF327) {ECO:0000313|EMBL:CEP94257.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6796..8106)
DNA (1311bp) protein (437aa)
EAL domain protein n=2 Tax=Clostridium sordellii RepID=T0CYN7_CLOSO
Signal transduction protein {ECO:0000313|EMBL:CEN70173.1}; Signal transduction protein,Bacteriophytochrome cph2,cyclic-di-GMP phosphodiesterase,Predicted signal transduction protein containing sensor and EAL domains,EAL domain {ECO:0000313|EMBL:CEK32907.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
diguanylate cyclase/phosphodiesterase
L3_060_057G1_scaffold_361_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8153..8821)
DNA (669bp) protein (223aa)
Transglycosylase {ECO:0000313|EMBL:CEN21710.1}; EC=4.2.2.- {ECO:0000313|EMBL:CEN21710.1};; Transglycosylase,Membrane-bound lytic murein transglycosylase F,lytic murein transglycosylase,Transglycosylase SLT domain {ECO:0000313|EMBL:CEK32906.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Transglycosylase SLT domain protein n=2 Tax=Clostridium sordellii RepID=T0D8H7_CLOSO
transglycosylase
L3_060_057G1_scaffold_361_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9111..9950
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D8F8_CLOSO
TraB family {ECO:0000313|EMBL:CEN89107.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_361_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10540..11415
DNA (876bp) protein (292aa)
Mechanosensitive ion channel family protein n=2 Tax=Clostridium sordellii RepID=T0EGD1_CLOSO
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:CEN70176.1}; Mechanosensitive ion channel family protein,Small-conductance mechanosensitive channel,mechanosensitive channel MscS,Mechanosensitive ion channel {ECO:0000313|EMBL:CEK32904.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
mechanosensitive ion channel protein
L3_060_057G1_scaffold_361_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11450..12376)
DNA (927bp) protein (309aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0EBJ2_CLOSO
gtaB; UTP--glucose-1-phosphate uridylyltransferase
L3_060_057G1_scaffold_361_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12917..14053)
DNA (1137bp) protein (379aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CEO09816.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CEO09816.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
UDP-N-acetyl-D-glucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CQX9_CLOSO
L3_060_057G1_scaffold_361_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14059..15105)
DNA (1047bp) protein (349aa)
Sialic acid synthase (N-acetylneuraminic acid synthetase) n=1 Tax=Arcobacter butzleri 7h1h RepID=S5PRD2_9PROT
Sialic acid synthase {ECO:0000313|EMBL:CEN76456.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
sialic acid synthase (N-acetylneuraminic acid synthetase)
L3_060_057G1_scaffold_361_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15465..16157)
DNA (693bp) protein (231aa)
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:CEN76457.1}; EC=2.7.7.43 {ECO:0000313|EMBL:CEN76457.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Acylneuraminate cytidylyltransferase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TJP8_CALOO
acylneuraminate cytidylyltransferase
L3_060_057G1_scaffold_361_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16311..16847
DNA (537bp) protein (179aa)
VanZ like family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D8I2_CLOSO
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:CEO28047.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
VanZ family protein
L3_060_057G1_scaffold_361_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16898..17311)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CZQ8_CLOSO
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CEP49023.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17461..18540)
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CEP49024.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
two-component sensor histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037F106D
L3_060_057G1_scaffold_361_24
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18572..19270)
DNA (699bp) protein (233aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VGP7_CLOBI
Two-component response regulator {ECO:0000313|EMBL:CEN91392.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK32898.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
two-component response regulator
L3_060_057G1_scaffold_361_25
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19288..19992)
DNA (705bp) protein (235aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CEN29857.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CEN29857.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
D-alanyl-D-alanine carboxypeptidase family protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0CQQ0_CLOSO
D-alanyl-D-alanine carboxypeptidase
L3_060_057G1_scaffold_361_26
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20166..20471)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWA8_CLOA9
Uncharacterised protein {ECO:0000313|EMBL:CEP90999.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20473..20769)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035F0A22
Protein of uncharacterised function(DUF2089) {ECO:0000313|EMBL:CEN29855.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK32895.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_28
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20929..22122
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD133 RepID=R8DQM6_BACCE
Uncharacterised protein {ECO:0000313|EMBL:CEO13891.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_060_057G1_scaffold_361_29
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22211..22651)
DNA (441bp) protein (147aa)
Putative lipoprotein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D8G1_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEP94242.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_060_057G1_scaffold_361_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22724..23218)
DNA (495bp) protein (165aa)
Acetyltransferase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0EGD4_CLOSO
GNAT family acetyltransferase {ECO:0000313|EMBL:CEP39059.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
N-acetyltransferase GCN5
Displaying items 1-30 of 54 in total

View Taxonomy