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L3_060_057G1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_378_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..961
DNA (960bp) protein (320aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
DNA polymerase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R377_CLOPF
polA; DNA polymerase I
L3_060_057G1_scaffold_378_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

978..1577
DNA (600bp) protein (200aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Dephospho-CoA kinase n=8 Tax=Clostridium perfringens RepID=COAE_CLOPE
L3_060_057G1_scaffold_378_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1587..2132
DNA (546bp) protein (182aa)
Transglycosylase, SLT family n=2 Tax=Clostridium perfringens RepID=Q0TNW9_CLOP1
Slt family transglycosylase
Transglycosylase, SLT family {ECO:0000313|EMBL:EDT25343.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_378_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2157..3299
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIX2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81697.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_057G1_scaffold_378_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3585..4181
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=B1R373_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27762.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_060_057G1_scaffold_378_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4304..5224
DNA (921bp) protein (307aa)
Hydrolase, alpha/beta fold family n=2 Tax=Clostridium perfringens RepID=Q0TNX2_CLOP1
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:EDT72800.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_060_057G1_scaffold_378_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5345..6280
DNA (936bp) protein (312aa)
Tetratricopeptide repeat protein n=7 Tax=Clostridium perfringens RepID=Q0TNX3_CLOP1
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT16236.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_378_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6401..8287
DNA (1887bp) protein (629aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSW9_CLOPF
sensor histidine kinase
L3_060_057G1_scaffold_378_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8277..10313
DNA (2037bp) protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Sensor histidine kinase n=2 Tax=Clostridium perfringens RepID=Q0TNX5_CLOP1
sensor histidine kinase
L3_060_057G1_scaffold_378_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10359..10856
DNA (498bp) protein (166aa)
TspO/MBR family protein n=2 Tax=Clostridium perfringens RepID=Q0TNX6_CLOP1
TspO/MBR family protein
TspO/MBR family protein {ECO:0000313|EMBL:EDT25249.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_378_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11019..12176
DNA (1158bp) protein (386aa)
Putative amidohydrolase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R367_CLOPF
Putative amidohydrolase {ECO:0000313|EMBL:EDT25332.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
amidohydrolase
L3_060_057G1_scaffold_378_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12404..14566
DNA (2163bp) protein (721aa)
DNA topoisomerase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REF4_CLOPF
DNA topoisomerase {ECO:0000313|EMBL:EDT27800.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
DNA topoisomerase
L3_060_057G1_scaffold_378_13
unknown

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14514..14666
DNA (153bp) protein (51aa)

This feature has no annotations

L3_060_057G1_scaffold_378_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14634..15089)
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BIN2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80456.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_060_057G1_scaffold_378_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15187..15897)
DNA (711bp) protein (237aa)
LrgB-like family protein n=4 Tax=Clostridium perfringens RepID=Q0TNY0_CLOP1
lrgB-like family protein
LrgB-like family protein {ECO:0000313|EMBL:EDT16367.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_378_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15890..16267)
DNA (378bp) protein (126aa)
LrgA family protein n=8 Tax=Clostridium perfringens RepID=Q0TNY1_CLOP1
LrgA family protein
LrgA family protein {ECO:0000313|EMBL:EDT27816.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_060_057G1_scaffold_378_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16379..17197)
DNA (819bp) protein (273aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R362_CLOPF
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDT25186.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_060_057G1_scaffold_378_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17323..18333)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R361_CLOPF
L3_060_057G1_scaffold_378_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18923..19567
DNA (645bp) protein (215aa)
pyrophosphatase PpaX (EC:3.6.1.1)
HAD-superfamily hydrolase, subfamily IA n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R360_CLOPF
HAD-superfamily hydrolase, subfamily IA {ECO:0000313|EMBL:EDT25228.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_060_057G1_scaffold_378_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19621..20892)
DNA (1272bp) protein (424aa)
D-alanyl-D-alanine carboxypeptidase family protein n=4 Tax=Clostridium perfringens RepID=H7CY02_CLOPF
dacF; D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EIA16457.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_378_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21071..21637
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CY01_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16456.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_060_057G1_scaffold_378_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21807..21962
DNA (156bp) protein (52aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CY00_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16259.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_378_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22102..22371)
DNA (270bp) protein (90aa)
Acylphosphatase n=5 Tax=Clostridium perfringens RepID=ACYP_CLOP1
acylphosphatase
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_060_057G1_scaffold_378_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22556..22987
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Nucleoside diphosphate kinase n=9 Tax=Clostridium perfringens RepID=NDK_CLOP1
nucleoside diphosphate kinase
L3_060_057G1_scaffold_378_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23022..24104)
DNA (1083bp) protein (361aa)
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein n=4 Tax=Clostridium perfringens RepID=Q0TNZ0_CLOP1
potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein
Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein {ECO:0000313|EMBL:EDT72772.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_060_057G1_scaffold_378_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24106..24906)
DNA (801bp) protein (267aa)
Spermidine/putrescine ABC transporter, permease protein PotC n=4 Tax=Clostridium perfringens RepID=Q0TNZ1_CLOP1
potC; spermidine/putrescine ABC transporter permease PotC
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:EDS80193.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_060_057G1_scaffold_378_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24900..25745)
DNA (846bp) protein (282aa)
Spermidine/putrescine ABC transporter, permease protein PotB n=8 Tax=Clostridium perfringens RepID=H7CXZ5_CLOPF
potB; spermidine/putrescine ABC transporter permease PotB
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:EIA16450.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_060_057G1_scaffold_378_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25748..26797)
DNA (1050bp) protein (350aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Spermidine/putrescine ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=H7CXZ4_CLOPF
potA; spermidine/putrescine ABC transporter ATP-binding protein
L3_060_057G1_scaffold_378_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26829..27368)
DNA (540bp) protein (180aa)
DNA-binding protein n=10 Tax=Clostridium perfringens RepID=H7CXZ3_CLOPF
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81673.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_060_057G1_scaffold_378_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27694..28770
DNA (1077bp) protein (359aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLA6_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT27714.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
GNAT family acetyltransferase
Displaying items 1-30 of 43 in total

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