ggKbase home page

L3_060_057G1_scaffold_431

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_431_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(1..114)
DNA (114bp) protein (38aa)
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RID9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42801.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_431_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(136..702)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42800.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Protein of unknown function (DUF1393).
L3_060_057G1_scaffold_431_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(931..1581)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42799.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_057G1_scaffold_431_4
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1612..3588)
DNA (1977bp) protein (659aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AAA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85076.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Uncharacterized metal-binding protein
L3_060_057G1_scaffold_431_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(3655..4323)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S803_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42797.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Pterin binding enzyme.
L3_060_057G1_scaffold_431_6
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4550..5896)
DNA (1347bp) protein (449aa)
acetyl-CoA decarbonylase/synthase gamma subunit (EC:1.2.99.2 2.1.1.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NFH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC07144.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_060_057G1_scaffold_431_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(5922..6860)
DNA (939bp) protein (313aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42795.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_431_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(7140..9266)
DNA (2127bp) protein (709aa)
carbon monoxide dehydrogenase/acetyl-coa synthase subunit alpha (EC:2.3.1.169)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42794.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_431_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9288..10055)
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=3 Tax=Lachnospiraceae RepID=C9L8P9_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC07150.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
CO dehydrogenase maturation factor
L3_060_057G1_scaffold_431_10
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10129..12021)
DNA (1893bp) protein (631aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase n=2 Tax=Lachnospiraceae RepID=F3AAB4_9FIRM
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:CDC07152.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_060_057G1_scaffold_431_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(12191..12961)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42791.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
CO dehydrogenase maturation factor
L3_060_057G1_scaffold_431_12
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13001..13918)
DNA (918bp) protein (306aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AAB6_9FIRM
L3_060_057G1_scaffold_431_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13976..14158)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42789.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted RNA-binding protein.
L3_060_057G1_scaffold_431_14
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14162..14494)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L8P3_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC07158.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_057G1_scaffold_431_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

14895..15731
DNA (837bp) protein (279aa)
methylglyoxal reductase (EC:1.1.1.283)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S7Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42787.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_431_16
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15810..16820)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Blautia producta RepID=UPI0003745DEF
L3_060_057G1_scaffold_431_17
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16826..17470)
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase n=2 Tax=Lachnospiraceae RepID=F3AAC1_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_060_057G1_scaffold_431_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(17477..18802)
DNA (1326bp) protein (442aa)
GTPase Der n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIA4_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ribosome-associated GTPase EngA
L3_060_057G1_scaffold_431_19
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18765..20147)
DNA (1383bp) protein (461aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L8N7_BLAHA
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EEX21729.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L3_060_057G1_scaffold_431_20
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20311..21474
DNA (1164bp) protein (388aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=3 Tax=Lachnospiraceae RepID=C9L8N6_BLAHA
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDC07169.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_060_057G1_scaffold_431_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21519..22757)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NLP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC07171.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_060_057G1_scaffold_431_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(22890..23711)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBT3_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
conserved hypothetical protein TIGR00726
L3_060_057G1_scaffold_431_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(23716..24090)
DNA (375bp) protein (125aa)
UPF0102 protein BN652_02627 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R1M3_9FIRM
UPF0102 protein BN652_02627 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_057G1_scaffold_431_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24087..24854)
DNA (768bp) protein (256aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S7V4_9FIRM
L3_060_057G1_scaffold_431_25
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24869..25714)
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=3 Tax=Lachnospiraceae RepID=C9L8N2_BLAHA
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
ribosome biogenesis GTP-binding protein YlqF
L3_060_057G1_scaffold_431_26
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25734..26375)
DNA (642bp) protein (214aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=3 Tax=Lachnospiraceae RepID=C9L8N1_BLAHA
L3_060_057G1_scaffold_431_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26430..26777)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=2 Tax=Lachnospiraceae RepID=F3AAD0_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ribosomal protein L19, bacterial type
L3_060_057G1_scaffold_431_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26905..28362)
DNA (1458bp) protein (486aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R1L9_9FIRM
L3_060_057G1_scaffold_431_29
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28373..28879)
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=2 Tax=Lachnospiraceae RepID=C9L8M8_BLAHA
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
rimM; 16S rRNA-processing protein RimM
L3_060_057G1_scaffold_431_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28981..29211)
DNA (231bp) protein (77aa)
UPF0109 protein BN652_02620 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RI90_9FIRM
UPF0109 protein BN652_02620 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
RNA-binding protein (KH domain)
Displaying items 1-30 of 95 in total

View Taxonomy