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L3_060_057G1_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_469_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

381..617
DNA (237bp) protein (79aa)
RNA-binding protein Hfq n=3 Tax=Clostridiales RepID=G9YVJ3_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hfq; Hfq protein
L3_060_057G1_scaffold_469_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

627..1919
DNA (1293bp) protein (431aa)
Putative membrane fusion protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57452.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1938..2645
DNA (708bp) protein (236aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Clostridiales RepID=G9YVJ1_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHO35192.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2669..3169
DNA (501bp) protein (167aa)
Cell division protein SepF n=3 Tax=Clostridiales RepID=G9YVJ0_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
sepF; cell division protein SepF
L3_060_057G1_scaffold_469_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3346..4071
DNA (726bp) protein (242aa)
DivIVA domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57449.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative cell division protein
L3_060_057G1_scaffold_469_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4477..7272
DNA (2796bp) protein (932aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D9_9FIRM
L3_060_057G1_scaffold_469_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7692..9554)
DNA (1863bp) protein (621aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AXT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57447.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9702..10178
DNA (477bp) protein (159aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
lspA; putative signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL13_9CLOT
L3_060_057G1_scaffold_469_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10153..11067
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D6_9FIRM
L3_060_057G1_scaffold_469_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11280..11873
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C8D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57444.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative thiamine transporter
L3_060_057G1_scaffold_469_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11877..12695
DNA (819bp) protein (273aa)
HAD hydrolase, family IIB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57443.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12784..14217)
DNA (1434bp) protein (478aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Xaa-His dipeptidase (Fragment) n=2 Tax=Clostridiales RepID=G9YVI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57442.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_060_057G1_scaffold_469_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14363..14920)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35182.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15045..15629
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM40465.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative HD superfamily hydrolase
L3_060_057G1_scaffold_469_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15633..17015
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57439.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative efflux protein, MATE family
L3_060_057G1_scaffold_469_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17057..17311)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35179.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17497..19050
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35178.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19251..20297
DNA (1047bp) protein (349aa)
Chlorophyll synthesis pathway, bchC n=2 Tax=Clostridiales RepID=H1C8C7_9FIRM
Chlorophyll synthesis pathway, bchC {ECO:0000313|EMBL:EHO35177.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
alcohol dehydrogenase GroES-like protein
L3_060_057G1_scaffold_469_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20311..20703
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase family protein n=3 Tax=Clostridiales RepID=G9YVG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35176.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_469_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20888..21634
DNA (747bp) protein (249aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Clostridiales RepID=G9YVG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35175.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L3_060_057G1_scaffold_469_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21714..22670
DNA (957bp) protein (319aa)
Phosphotriesterase family protein n=2 Tax=Clostridiales RepID=G9YVG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57434.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22716..23657
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YVG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57433.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23679..24602
DNA (924bp) protein (308aa)
Phosphoglycerate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C2_9FIRM
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EHO35233.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
L3_060_057G1_scaffold_469_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24618..24947
DNA (330bp) protein (110aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BG11_9CLOT
Xylulokinase {ECO:0000313|EMBL:EHO35232.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Xylulokinase
L3_060_057G1_scaffold_469_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24784..25776)
DNA (993bp) protein (331aa)
Chlorophyll synthesis pathway, bchC n=2 Tax=Clostridiales RepID=H1C8B7_9FIRM
Chlorophyll synthesis pathway, bchC {ECO:0000313|EMBL:EHO35228.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_469_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25811..26926)
DNA (1116bp) protein (372aa)
Putative glycerol dehydrogenase n=2 Tax=Clostridiales RepID=G9YVF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57426.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
iron-containing alcohol dehydrogenase
L3_060_057G1_scaffold_469_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26968..27633)
DNA (666bp) protein (222aa)
HAD hydrolase, family IA n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57425.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
haloacid dehalogenase superfamily protein
L3_060_057G1_scaffold_469_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27621..28202)
DNA (582bp) protein (194aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=2 Tax=Clostridiales RepID=G9YVF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57424.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_060_057G1_scaffold_469_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28222..29229)
DNA (1008bp) protein (336aa)
Putative ribose transport system permease protein RbsC n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57423.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
inner-membrane translocator
L3_060_057G1_scaffold_469_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29244..30839)
DNA (1596bp) protein (532aa)
Putative ribose transport ATP-binding protein rbsa n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BXW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57422.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter-like protein
Displaying items 1-30 of 49 in total

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