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L3_060_057G1_scaffold_478

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_478_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(266..1105)
DNA (840bp) protein (280aa)
carboxybiotin decarboxylase subunit of malonate decarboxylase (EC:4.1.1.3)
Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit n=5 Tax=Clostridiales RepID=H1CLE0_9FIRM
Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit {ECO:0000313|EMBL:EHO23389.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_478_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1107..1244)
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53564.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_060_057G1_scaffold_478_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1261..2802)
DNA (1542bp) protein (514aa)
Methylmalonyl-CoA carboxyltransferase 12S subunit n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C409_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53565.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
AccA; acetyl-CoA carboxylase subunit alpha
L3_060_057G1_scaffold_478_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2808..3212)
DNA (405bp) protein (135aa)
Methylmalonyl-CoA epimerase n=3 Tax=Clostridiales RepID=G9YQC2_9FIRM
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KGF53566.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
methylmalonyl-CoA epimerase
L3_060_057G1_scaffold_478_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3193..4185)
DNA (993bp) protein (331aa)
LAO/AO transport system ATPase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLE5_9FIRM
LAO/AO transport system ATPase {ECO:0000313|EMBL:EHO23394.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LAO/AO transport system ATPase
L3_060_057G1_scaffold_478_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4163..4573)
DNA (411bp) protein (137aa)
B12 binding domain protein n=3 Tax=Clostridiales RepID=G9YQC4_9FIRM
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:EHO23395.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cobalamin B12-binding domain-containing protein
L3_060_057G1_scaffold_478_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4575..6221)
DNA (1647bp) protein (549aa)
Putative methylmalonyl-CoA mutase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQC5_9FIRM
Putative methylmalonyl-CoA mutase {ECO:0000313|EMBL:EHM51420.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Sbm; methylmalonyl-CoA mutase N-terminal domain-containing protein
L3_060_057G1_scaffold_478_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6668..7261)
DNA (594bp) protein (198aa)
Putative transposon DNA-invertase Bin3 n=2 Tax=Clostridiales RepID=G9YQC6_9FIRM
Putative transposon DNA-invertase Bin3 {ECO:0000313|EMBL:ERI68403.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_060_057G1_scaffold_478_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7945..8145)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53492.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_060_057G1_scaffold_478_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8312..9790)
DNA (1479bp) protein (493aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQC9_9FIRM
L3_060_057G1_scaffold_478_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9981..10493)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CL76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53494.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_478_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10490..12982)
DNA (2493bp) protein (831aa)
Negative regulator of genetic competence ClpC/MecB n=4 Tax=Clostridiales RepID=G9YQD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23692.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
L3_060_057G1_scaffold_478_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12987..13166)
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23693.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_478_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13310..13480
DNA (171bp) protein (57aa)
Ferredoxin n=3 Tax=Clostridiales RepID=G9YQD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23694.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
4Fe-4S binding domain.
L3_060_057G1_scaffold_478_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13558..14862
DNA (1305bp) protein (435aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CM26_9CLOT
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ERI68371.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_057G1_scaffold_478_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15104..16090)
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B964_9CLOT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KGF53499.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
UDP-glucose 4-epimerase
L3_060_057G1_scaffold_478_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16110..17072)
DNA (963bp) protein (321aa)
Putative esterase n=3 Tax=Clostridiales RepID=G9YQD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23697.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L3_060_057G1_scaffold_478_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17218..18510
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CM29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53501.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_478_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18529..19233
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CGJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68377.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_057G1_scaffold_478_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19374..19658
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23700.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_057G1_scaffold_478_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19722..20561
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CL86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53504.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
prolipoprotein diacylglyceryl transferase
L3_060_057G1_scaffold_478_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20733..21506)
DNA (774bp) protein (258aa)
Cof-like hydrolase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53505.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_478_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21542..22780)
DNA (1239bp) protein (413aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=2 Tax=Clostridiales RepID=H1CL88_9FIRM
L3_060_057G1_scaffold_478_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22842..23033)
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23704.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_478_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23038..24225)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CL90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23705.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_057G1_scaffold_478_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24188..24544)
DNA (357bp) protein (119aa)
Transcriptional regulator, PadR family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQE7_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EHM51442.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
PadR family transcriptional regulator
L3_060_057G1_scaffold_478_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24663..26279)
DNA (1617bp) protein (539aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Hydroxylamine reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CL92_9FIRM
hydroxylamine reductase
L3_060_057G1_scaffold_478_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26497..27111
DNA (615bp) protein (205aa)
Transcriptional regulator, TetR family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53511.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Transcriptional regulator
L3_060_057G1_scaffold_478_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27253..27738
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53512.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_060_057G1_scaffold_478_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28079..29707)
DNA (1629bp) protein (543aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B902_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI68293.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinases, DNA invertase Pin homologs
Displaying items 1-30 of 38 in total

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