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L3_060_057G1_scaffold_614

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_614_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(490..1860)
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AHE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80914.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
norM; Na+-driven multidrug efflux pump
L3_060_057G1_scaffold_614_2
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1936..3153)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WY41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04914.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_060_057G1_scaffold_614_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3155..5494)
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000366D1BD
Uncharacterized protein {ECO:0000313|EMBL:CCY98262.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
RND family efflux transporter MFP subunit
L3_060_057G1_scaffold_614_4
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(5528..7414)
DNA (1887bp) protein (629aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BUY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA62946.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_060_057G1_scaffold_614_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(7588..10050)
DNA (2463bp) protein (821aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SD42_9FIRM
L3_060_057G1_scaffold_614_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(10074..13217)
DNA (3144bp) protein (1048aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGQ3_9FIRM
L3_060_057G1_scaffold_614_7
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13683..13850)
DNA (168bp) protein (56aa)
DNA-damage-inducible protein D family protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HW08_9CLOT
DNA-damage-inducible protein D family protein {ECO:0000313|EMBL:CDE43879.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
dinD; DNA-damage-inducible protein D
L3_060_057G1_scaffold_614_8
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13847..14233)
DNA (387bp) protein (129aa)
DNA damage-inducible protein D n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030B91FB
dinD; DNA damage-inducible protein D
DNA damage-inducible protein D {ECO:0000313|EMBL:AHF09281.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_060_057G1_scaffold_614_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14259..14450)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S8R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43007.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted transcriptional regulator
L3_060_057G1_scaffold_614_10
Exiguobacterium sp. S17, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14703..15038)
DNA (336bp) protein (112aa)
family 31 glycosyl hydrolase (EC:3.2.1.-)
Glycosyl hydrolases 31 family protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FHC7_9BACL
Glycosyl hydrolases 31 family protein {ECO:0000313|EMBL:EPE61249.1}; TaxID=856854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. S17.;"
L3_060_057G1_scaffold_614_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15035..15487)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80713.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transposase and inactivated derivatives
L3_060_057G1_scaffold_614_12
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15691..17652)
DNA (1962bp) protein (654aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AEC8_9FIRM
L3_060_057G1_scaffold_614_13
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17690..18172)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=3 Tax=Lachnospiraceae RepID=C9L9C4_BLAHA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
transcription elongation factor GreA
L3_060_057G1_scaffold_614_14
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18364..19320)
DNA (957bp) protein (319aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
tRNA-dihydrouridine synthase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AED0_9FIRM
tRNA-U20-dihydrouridine synthase
L3_060_057G1_scaffold_614_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(19322..20101)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Type III pantothenate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCN9_9FIRM
Baf family transcriptional activator
L3_060_057G1_scaffold_614_16
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20105..20440)
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L9C2_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX21268.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_060_057G1_scaffold_614_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(20453..21259)
DNA (807bp) protein (269aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S8U4_9FIRM
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:CDC43042.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_614_18
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(21265..22254)
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Blautia producta RepID=UPI00037F2CDE
L3_060_057G1_scaffold_614_19
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22298..23470)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NL65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09069.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
patatin
L3_060_057G1_scaffold_614_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(23547..24482)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43039.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Membrane protease subunits, stomatin/prohibitin homologs
L3_060_057G1_scaffold_614_21
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24484..24924)
DNA (441bp) protein (147aa)
Nodulation efficiency protein D n=3 Tax=Lachnospiraceae RepID=C9L9B7_BLAHA
Nodulation efficiency protein D {ECO:0000313|EMBL:EEX21263.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Membrane protein implicated in regulation of membrane protease activity
L3_060_057G1_scaffold_614_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

25294..25674
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48438.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
putative Xre family DNA-binding protein
L3_060_057G1_scaffold_614_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25698..26432)
DNA (735bp) protein (245aa)
Tat pathway signal sequence domain protein n=3 Tax=Lachnospiraceae RepID=C9L9B6_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC09074.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Cell Wall Hydrolase./Bacterial SH3 domain.
L3_060_057G1_scaffold_614_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26629..27477)
DNA (849bp) protein (283aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJ64_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDC43036.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
RNA methyltransferase, TrmH family, group 3
L3_060_057G1_scaffold_614_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27503..28504)
DNA (1002bp) protein (334aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Lachnospiraceae RepID=C9L9B4_BLAHA
L3_060_057G1_scaffold_614_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28501..31974)
DNA (3474bp) protein (1158aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCM9_9FIRM
L3_060_057G1_scaffold_614_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31991..32515)
DNA (525bp) protein (175aa)
Methyltransferase domain protein n=3 Tax=Lachnospiraceae RepID=C9L9B2_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC09082.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
type 11 methyltransferase
L3_060_057G1_scaffold_614_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(32582..33421)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S8T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43032.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_060_057G1_scaffold_614_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(33433..34137)
DNA (705bp) protein (235aa)
Putative acyl carrier protein thioesteraseprotein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJ60_9FIRM
Putative acyl carrier protein thioesteraseprotein {ECO:0000313|EMBL:CDC43031.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Acyl-ACP thioesterase
L3_060_057G1_scaffold_614_30
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34618..35070
DNA (453bp) protein (151aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax=Lachnospiraceae RepID=C9L8X5_BLAHA
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEX21425.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
D-alanyl-D-alanine carboxypeptidase
Displaying items 1-30 of 74 in total

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