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L3_060_057G1_scaffold_652

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_652_1
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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366..644
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N1ZGR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS42455.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L3_060_057G1_scaffold_652_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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836..1798
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9ND96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80931.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
plasmid mobilization system relaxase
L3_060_057G1_scaffold_652_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1948..2130
DNA (183bp) protein (61aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Dorea sp. 5-2 RepID=R9NCA1_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEA82564.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Excisionase from transposon Tn916.
L3_060_057G1_scaffold_652_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2241..3440
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78577.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinase XerD
L3_060_057G1_scaffold_652_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3626..4108
DNA (483bp) protein (161aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SIX9_9CLOT
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDC46532.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_060_057G1_scaffold_652_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4119..4817)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45464.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
G-D-S-L family lipolytic protein
L3_060_057G1_scaffold_652_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4897..5565
DNA (669bp) protein (223aa)
Transcriptional regulator, Crp/Fnr family n=3 Tax=Lachnospiraceae RepID=C9L3U6_BLAHA
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EEX23227.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Crp family transcriptional regulator
L3_060_057G1_scaffold_652_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5622..5930)
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Lachnospiraceae RepID=F3AFU2_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
thioredoxin
L3_060_057G1_scaffold_652_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6026..6919)
DNA (894bp) protein (298aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NL37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC06956.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_060_057G1_scaffold_652_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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7521..8117
DNA (597bp) protein (199aa)
ATP synthase subunit a n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SI75_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP synthase F0 subunit A
L3_060_057G1_scaffold_652_11
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8146..8358
DNA (213bp) protein (71aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=3 Tax=Lachnospiraceae RepID=C9L3U1_BLAHA
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L3_060_057G1_scaffold_652_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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8392..8892
DNA (501bp) protein (167aa)
ATP synthase subunit b n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SI70_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP synthase F0 subunit B
L3_060_057G1_scaffold_652_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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8873..9376
DNA (504bp) protein (168aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLX3_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_652_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

9382..10890
DNA (1509bp) protein (503aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP synthase subunit alpha n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLW8_9FIRM
ATP synthase F1 subunit alpha
L3_060_057G1_scaffold_652_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

10895..11788
DNA (894bp) protein (298aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT81_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_060_057G1_scaffold_652_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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11806..13194
DNA (1389bp) protein (463aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBM0_9FIRM
L3_060_057G1_scaffold_652_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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13218..13628
DNA (411bp) protein (137aa)
ATP synthase epsilon chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT76_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
F0F1-type ATP synthase epsilon subunit
L3_060_057G1_scaffold_652_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13836..14354
DNA (519bp) protein (173aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=3 Tax=Lachnospiraceae RepID=C9L6F9_BLAHA
Acetolactate synthase {ECO:0000313|EMBL:EGG82894.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L3_060_057G1_scaffold_652_19
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14412..15425
DNA (1014bp) protein (338aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Lachnospiraceae RepID=C9L6F8_BLAHA
L3_060_057G1_scaffold_652_20
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15768..16775
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JMZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65294.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
transcriptional regulator
L3_060_057G1_scaffold_652_21
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16803..17771
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6PHU9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEX21215.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
carbohydrate ABC transporter membrane protein 1
L3_060_057G1_scaffold_652_22
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17783..18712
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JR54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65292.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_060_057G1_scaffold_652_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18754..20202
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PHU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09342.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_060_057G1_scaffold_652_24
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20293..23394
DNA (3102bp) protein (1034aa)
Alpha-mannosidase (EC:3.2.1.24)
Glycosyl hydrolase family 38 C-terminal domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGS8_9FIRM
Glycosyl hydrolase family 38 C-terminal domain protein {ECO:0000313|EMBL:EET60278.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_060_057G1_scaffold_652_25
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23425..25860
DNA (2436bp) protein (812aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGT0_9FIRM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EET60280.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
beta-mannosidase
L3_060_057G1_scaffold_652_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(25924..26817)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46299.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbonate dehydratase
L3_060_057G1_scaffold_652_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

26943..28211
DNA (1269bp) protein (423aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT66_9FIRM
L3_060_057G1_scaffold_652_28
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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28251..28628
DNA (378bp) protein (126aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IQJ8_9FIRM
Displaying 28 items

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