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L3_060_057G1_scaffold_778

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_778_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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236..463
DNA (228bp) protein (76aa)
Tautomerase PptA {ECO:0000256|HAMAP-Rule:MF_00718}; EC=5.3.2.- {ECO:0000256|HAMAP-Rule:MF_00718};; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
Tautomerase PptA n=19 Tax=Enterobacteriaceae RepID=PPTA_SHISS
ydcE; 4-oxalocrotonate tautomerase
L3_060_057G1_scaffold_778_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(467..1036)
DNA (570bp) protein (190aa)
Flavin reductase n=2 Tax=Escherichia coli RepID=L2V173_ECOLX
Flavin reductase {ECO:0000313|EMBL:ESK09364.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
flavin reductase domain protein
L3_060_057G1_scaffold_778_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1211..2056
DNA (846bp) protein (282aa)
nhoA; N-hydroxyarylamine O-acetyltransferase (EC:2.3.1.118)
N-hydroxyarylamine O-acetyltransferase {ECO:0000313|EMBL:EFZ55770.1}; EC=2.3.1.118 {ECO:0000313|EMBL:EFZ55770.1};; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
N-hydroxyarylamine O-acetyltransferase n=24 Tax=Escherichia coli RepID=C6EEQ1_ECOBD
L3_060_057G1_scaffold_778_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2152..2412)
DNA (261bp) protein (87aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Escherichia coli 53638 RepID=B2NDP6_ECOLX
phenazine biosynthesis protein PhzF family protein
Uncharacterized protein {ECO:0000313|EMBL:KDU28181.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L3_060_057G1_scaffold_778_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2479..3045)
DNA (567bp) protein (189aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Escherichia coli AD30 RepID=K5CHP0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHH04165.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_060_057G1_scaffold_778_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3124..3804)
DNA (681bp) protein (227aa)
narV; nitrate reductase 2 subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase 2 gamma chain n=660 Tax=Enterobacteriaceae RepID=NARV_ECO57
Respiratory nitrate reductase 2 gamma chain {ECO:0000313|EMBL:ELE00818.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_060_057G1_scaffold_778_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3801..4496)
DNA (696bp) protein (232aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=3 Tax=Escherichia coli RepID=L2V177_ECOLX
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:ELC09028.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
narW; nitrate reductase 2 (NRZ), delta subunit (assembly subunit)
L3_060_057G1_scaffold_778_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4496..6040)
DNA (1545bp) protein (515aa)
Nitrate reductase, beta subunit {ECO:0000313|EMBL:KEO34866.1}; EC=1.7.99.4 {ECO:0000313|EMBL:KEO34866.1};; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
Cryptic nitrate reductase 2, beta subunit n=278 Tax=Enterobacteriaceae RepID=J7QQW7_ECOLX
narY; nitrate reductase 2 subunit beta
L3_060_057G1_scaffold_778_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6037..9777)
DNA (3741bp) protein (1247aa)
Respiratory nitrate reductase 2 alpha chain n=11 Tax=Escherichia RepID=E3PLW9_ECOH1
Respiratory nitrate reductase 2 alpha chain {ECO:0000313|EMBL:ELC09030.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
respiratory nitrate reductase 2 alpha chain
L3_060_057G1_scaffold_778_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9859..11247)
DNA (1389bp) protein (463aa)
Nitrite extrusion protein 2 n=327 Tax=Escherichia coli RepID=J7R0U9_ECOLX
narU; nitrate/nitrite transporter
Nitrite extrusion protein 2 {ECO:0000313|EMBL:ESA64628.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_060_057G1_scaffold_778_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11571..12866)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V2QVQ6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK09373.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L3_060_057G1_scaffold_778_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12926..13216)
DNA (291bp) protein (97aa)
Putative uncharacterized protein YddL n=383 Tax=Enterobacteriaceae RepID=YDDL_ECOLI
yddL; putative lipoprotein
Outer membrane porin protein ompD {ECO:0000313|EMBL:ELE00825.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_060_057G1_scaffold_778_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13475..14299)
DNA (825bp) protein (275aa)
Uncharacterized protein n=477 Tax=Enterobacteriaceae RepID=B6IAM4_ECOSE
yddG; hypothetical protein
YddG protein {ECO:0000313|EMBL:CAU97459.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L3_060_057G1_scaffold_778_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..15175
DNA (588bp) protein (196aa)
formate dehydrogenase, subunit alpha (EC:1.7.99.4)
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:EFK01325.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EFK01325.1};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
Formate dehydrogenase-N, alpha subunit, nitrate-inducible n=9 Tax=Escherichia RepID=B7LQW5_ESCF3
L3_060_057G1_scaffold_778_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15313..17499
DNA (2187bp) protein (729aa)
fdnG; formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing (EC:1.2.1.2)
Formate dehydrogenase, nitrate-inducible, major subunit n=2 Tax=Escherichia coli RepID=L2V0H1_ECOLX
Formate dehydrogenase, nitrate-inducible, major subunit {ECO:0000313|EMBL:ESK09377.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L3_060_057G1_scaffold_778_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17512..18396
DNA (885bp) protein (295aa)
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EFK44096.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EFK44096.1};; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit n=565 Tax=Bacteria RepID=FDNH_ECOLI
fdnH; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible
L3_060_057G1_scaffold_778_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18389..19042
DNA (654bp) protein (218aa)
Formate dehydrogenase N gamma subunit n=1 Tax=Escherichia coli IS5 RepID=V6ET23_ECOLX
formate dehydrogenase-N subunit gamma
Formate dehydrogenase-N subunit gamma {ECO:0000313|EMBL:EJE72193.1}; TaxID=1165939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H11 str. CVM9455.;"
L3_060_057G1_scaffold_778_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19271..19555)
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=J7R0W1_ECOLX
yddM; putative DNA-binding transcriptional regulator
Addiction module antidote protein HigA {ECO:0000313|EMBL:EIG83836.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L3_060_057G1_scaffold_778_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19701..20711)
DNA (1011bp) protein (337aa)
adhP; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, propanol-preferring n=141 Tax=Escherichia RepID=ADHP_ECOLI
Oxidoreductase, zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EKJ80538.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L3_060_057G1_scaffold_778_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20845..22542)
DNA (1698bp) protein (566aa)
NAD-dependent malic enzyme {ECO:0000255|HAMAP-Rule:MF_01619}; Short=NAD-ME {ECO:0000255|HAMAP-Rule:MF_01619};; EC=1.1.1.38 {ECO:0000255|HAMAP-Rule:MF_01619};; TaxID=481805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks).;"
sfcA; malate dehydrogenase (EC:1.1.1.38)
NAD-dependent malic enzyme n=30 Tax=Escherichia coli RepID=MAO1_ECOHS
L3_060_057G1_scaffold_778_21
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22699..22836)
DNA (138bp) protein (46aa)
Stationary-phase-induced ribosome-associated protein n=1369 Tax=Enterobacteriaceae RepID=SRA_ECO57
rpsV; 30S ribosomal subunit S22
Stationary-phase-induced ribosome-associated protein {ECO:0000313|EMBL:EOV50270.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
L3_060_057G1_scaffold_778_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22938..23153)
DNA (216bp) protein (72aa)
Protein bdm n=222 Tax=Escherichia RepID=BDM_ECOLI
biofilm-dependent modulation protein
Biofilm-dependent modulation family protein {ECO:0000313|EMBL:ENB25300.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L3_060_057G1_scaffold_778_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23498..23929
DNA (432bp) protein (144aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin osmC {ECO:0000313|EMBL:EZJ52188.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EZJ52188.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Peroxiredoxin OsmC n=833 Tax=Enterobacteriaceae RepID=OSMC_ECOLI
L3_060_057G1_scaffold_778_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23985..24911)
DNA (927bp) protein (309aa)
Probable D,D-dipeptide transport ATP-binding protein DdpF n=200 Tax=Escherichia RepID=DDPF_ECOLI
oligopeptide/dipeptide ABC transporter ATPase
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ESP08802.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_060_057G1_scaffold_778_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24904..25890)
DNA (987bp) protein (329aa)
ABC transporter, ATP-binding protein n=23 Tax=Escherichia coli RepID=B2NDR4_ECOLX
D,D-dipeptide transport ATP-binding protein DdpD
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ELC09046.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L3_060_057G1_scaffold_778_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25887..26783)
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=149 Tax=Enterobacteriaceae RepID=B1IRX3_ECOLC
D-ala-D-ala transporter subunit
YddQ {ECO:0000313|EMBL:EHX31341.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_060_057G1_scaffold_778_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26780..27754)
DNA (975bp) protein (325aa)
D-Ala-D-Ala transporter subunit n=2 Tax=Escherichia coli RepID=L2V194_ECOLX
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ESK09389.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
peptide ABC transporter permease
L3_060_057G1_scaffold_778_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27804..29354)
DNA (1551bp) protein (517aa)
D-Ala-D-Ala transporter subunit n=2 Tax=Escherichia coli RepID=L2V2G4_ECOLX
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ESK09390.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
ddpA; D-alanine-D-alanine ABC transporter periplasmic-binding protein
L3_060_057G1_scaffold_778_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29368..29949)
DNA (582bp) protein (194aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
D-alanyl-D-alanine dipeptidase n=2 Tax=Escherichia coli RepID=L2V3R6_ECOLX
D-alanyl-D-alanine dipeptidase
L3_060_057G1_scaffold_778_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30236..32635)
DNA (2400bp) protein (800aa)
cAMP phosphodiesterase n=6 Tax=Escherichia coli RepID=D6IAI7_ECOLX
C-di-GMP phosphodiesterase {ECO:0000313|EMBL:KHI89426.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
dos; cAMP phosphodiesterase
Displaying items 1-30 of 34 in total

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