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L3_060_057G1_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_266_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(189..2654)
DNA (2466bp) protein (822aa)
HAD ATPase, P-type, family IC n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJ16_BIFBR
HAD ATPase, P-type, family IC {ECO:0000313|EMBL:EPD76406.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Lead, cadmium, zinc and mercury transporting ATPase
L3_060_057G1_scaffold_266_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3090..5123)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DR20_BIFLN
Peptidase {ECO:0000313|EMBL:KEY30801.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
protease
L3_060_057G1_scaffold_266_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5540..6853
DNA (1314bp) protein (438aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXC8_BIFLJ
queuine tRNA-ribosyltransferase
L3_060_057G1_scaffold_266_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7380..7799)
DNA (420bp) protein (140aa)
Acetyltransferase n=3 Tax=Bifidobacterium longum subsp. longum RepID=E4R178_BIFLM
Acetyltransferase {ECO:0000313|EMBL:KFI66250.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
acetyltransferase
L3_060_057G1_scaffold_266_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7992..8324)
DNA (333bp) protein (111aa)
UPF0145 protein BLD_1357 n=16 Tax=Bifidobacterium RepID=Y1357_BIFLD
hypothetical protein
UPF0145 protein BLIG_00571 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_060_057G1_scaffold_266_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8441..9931
DNA (1491bp) protein (497aa)
MutH n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R180_BIFLM
mutH; muth
DNA mismatch repair enzyme MutH {ECO:0000313|EMBL:EEI79957.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_060_057G1_scaffold_266_7
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10072..11361
DNA (1290bp) protein (430aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
Cytosine-specific methyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R181_BIFLM
dcm2; dcm2
L3_060_057G1_scaffold_266_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11389..12543
DNA (1155bp) protein (385aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
dcm; DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI86_9CLOT
L3_060_057G1_scaffold_266_9
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12561..14690
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UYA3_TSUPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG78210.1}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
L3_060_057G1_scaffold_266_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14754..15401)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9M1_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54630.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
flavin-nucleotide-binding protein
L3_060_057G1_scaffold_266_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15398..16372)
DNA (975bp) protein (325aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6S0_BIFLO
msrA; bifunctional methionine sulfoxide reductase A/B protein
L3_060_057G1_scaffold_266_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16978..19662)
DNA (2685bp) protein (895aa)
Lysyl-tRNA synthetase {ECO:0000313|EMBL:KFI66242.1}; EC=2.3.2.3 {ECO:0000313|EMBL:KFI66242.1};; EC=6.1.1.6 {ECO:0000313|EMBL:KFI66242.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXB8_BIFLJ
hypothetical protein
L3_060_057G1_scaffold_266_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19659..21218)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXB7_BIFLJ
esterase
Uncharacterized protein {ECO:0000313|EMBL:ADG99563.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_060_057G1_scaffold_266_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21736..21969
DNA (234bp) protein (78aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=B3DNV2_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY23985.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_060_057G1_scaffold_266_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22137..23093)
DNA (957bp) protein (319aa)
EamA-like transporter family n=2 Tax=Bifidobacterium longum RepID=D6DAU1_BIFLN
EamA-like transporter family.
Putative membrane protein {ECO:0000313|EMBL:EEQ54636.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_060_057G1_scaffold_266_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23387..24487)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZG6_9BIFI
hypothetical protein
Putative lysophospholipase {ECO:0000313|EMBL:EIJ26633.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_060_057G1_scaffold_266_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24598..27042
DNA (2445bp) protein (815aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEI79974.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEI79974.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXV7_BIFLN
dppX1; dppx1
L3_060_057G1_scaffold_266_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27227..27928
DNA (702bp) protein (234aa)
Uncharacterized protein n=17 Tax=Bifidobacterium RepID=B3DNW3_BIFLD
hypothetical protein
FHA domain protein {ECO:0000313|EMBL:CCK34013.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_060_057G1_scaffold_266_19
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27958..28491
DNA (534bp) protein (178aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=Q8G6Q4_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95012.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_060_057G1_scaffold_266_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28496..30190
DNA (1695bp) protein (565aa)
Phosphoprotein phosphatase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AUM1_BIFLN
phosphoprotein phosphatase
Phosphoprotein phosphatase {ECO:0000313|EMBL:AEI98408.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_060_057G1_scaffold_266_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30187..31746
DNA (1560bp) protein (520aa)
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division n=3 Tax=Bifidobacterium longum RepID=Q8G6Q2_BIFLO
cell division protein FtsW
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division {ECO:0000313|EMBL:AAN24410.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_060_057G1_scaffold_266_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31743..33209
DNA (1467bp) protein (489aa)
Probable penicillin binding protein transpeptidase n=3 Tax=Bifidobacterium longum RepID=Q8G6Q1_BIFLO
penicillin-binding protein
Penicillin-binding protein {ECO:0000313|EMBL:AIW43131.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_060_057G1_scaffold_266_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33206..34156
DNA (951bp) protein (317aa)
Serine/threonine protein kinase n=12 Tax=Bifidobacterium RepID=B3DNW8_BIFLD
serine-threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACD98827.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_060_057G1_scaffold_266_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34153..36267
DNA (2115bp) protein (705aa)
Protein kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXA1_BIFLJ
serine/threonine protein kinase
Protein kinase {ECO:0000313|EMBL:ADG99547.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_060_057G1_scaffold_266_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36452..37096)
DNA (645bp) protein (215aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase {ECO:0000313|EMBL:CBK71306.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CBK71306.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Anthranilate/para-aminobenzoate synthases component II n=15 Tax=Bifidobacterium RepID=B3DNX0_BIFLD
para-aminobenzoate synthase glutamine amidotransferase
L3_060_057G1_scaffold_266_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37147..38385)
DNA (1239bp) protein (413aa)
Sortase family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX99_BIFLJ
sortase
Sortase family protein {ECO:0000313|EMBL:ADG99545.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_060_057G1_scaffold_266_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38382..39182)
DNA (801bp) protein (267aa)
Putative membrane spanning protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XTX2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24416.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_060_057G1_scaffold_266_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39272..39742
DNA (471bp) protein (157aa)
Cell division protein CrgA n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX97_BIFLJ
septation inhibitor protein
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_060_057G1_scaffold_266_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40425..41099)
DNA (675bp) protein (225aa)
Peptidase, S54 family {ECO:0000313|EMBL:EIJ26627.1}; EC=3.4.21.- {ECO:0000313|EMBL:EIJ26627.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Rhomboid family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0J2_BIFLN
hypothetical protein
L3_060_057G1_scaffold_266_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41354..41572
DNA (219bp) protein (73aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DNX5_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98419.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Displaying items 1-30 of 38 in total

View Taxonomy