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L3_060_057G1_scaffold_1350

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_1350_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..837)
DNA (837bp) protein (279aa)
ABC sugar transport system, permease protein n=2 Tax=Bifidobacterium breve RepID=F9XZB6_BIFBU
ABC sugar transport system, permease protein
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERI86934.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_060_057G1_scaffold_1350_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(837..2402)
DNA (1566bp) protein (522aa)
ABC sugar transport system, ATP-binding protein {ECO:0000313|EMBL:KFI91060.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KFI91060.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC sugar transport system, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZB7_BIFBU
ABC sugar transport system, ATP-binding protein
L3_060_057G1_scaffold_1350_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2428..3603)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E3L0_BIFBR
Sugar-binding protein of ABC transporter system {ECO:0000313|EMBL:KFI91059.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Sugar-binding protein of ABC transporter system
L3_060_057G1_scaffold_1350_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4220..4441)
DNA (222bp) protein (74aa)
Transposase n=11 Tax=Bifidobacterium longum RepID=B3DTH4_BIFLD
Integrase catalytic region {ECO:0000313|EMBL:BAP83072.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
truncated transposase
L3_060_057G1_scaffold_1350_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4450..5130)
DNA (681bp) protein (227aa)
Transposase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWS3_BIFLJ
transposase
Transposase {ECO:0000313|EMBL:ADH01329.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_060_057G1_scaffold_1350_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5094..5891)
DNA (798bp) protein (266aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXB4_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80254.1}; Flags: Fragment;; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
transposase
L3_060_057G1_scaffold_1350_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6044..6571)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR15_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99298.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_060_057G1_scaffold_1350_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6746..8275)
DNA (1530bp) protein (510aa)
Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase multi-domain protein {ECO:0000313|EMBL:EIJ29728.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EIJ29728.1};; EC=4.1.2.25 {ECO:0000313|EMBL:EIJ29728.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase multi-domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B724_BIFLN
hypothetical protein
L3_060_057G1_scaffold_1350_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8385..9260)
DNA (876bp) protein (292aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Dihydropteroate synthase n=3 Tax=Bifidobacterium longum RepID=E8MEW7_BIFL2
dihydropteroate synthase
L3_060_057G1_scaffold_1350_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9348..9947)
DNA (600bp) protein (200aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
GTP cyclohydrolase 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3I6_BIFLM
GTP cyclohydrolase
L3_060_057G1_scaffold_1350_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9944..10036)
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3I5_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44879.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_060_057G1_scaffold_1350_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10042..12132)
DNA (2091bp) protein (697aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R3I4_BIFLM
hflB; hflb
L3_060_057G1_scaffold_1350_13
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12129..12692)
DNA (564bp) protein (188aa)
Hypoxanthine phosphoribosyltransferase n=11 Tax=Bifidobacterium RepID=D6ZW14_BIFLJ
hypoxanthine-guanine phosphoribosyltransferase
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CCY96445.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_060_057G1_scaffold_1350_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12679..13233)
DNA (555bp) protein (185aa)
tRNA(Ile)-lysidine synthase {ECO:0000255|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000255|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000255|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000255|HAMAP-Rule:MF_01161}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=TILS_BIFLD
mesJ; tRNA(Ile)-lysidine synthetase
Displaying 14 items

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