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L3_060_057G1_scaffold_1783

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_1783_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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120..260
DNA (141bp) protein (47aa)
UPF0237 protein BN474_00462 n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GSH0_9BIFI
UPF0237 protein BBKW_1555 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L3_060_057G1_scaffold_1783_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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297..1661
DNA (1365bp) protein (455aa)
UPF0210 protein HMPREF1313_1025 n=3 Tax=Bacteria RepID=I3B9D8_BIFLN
hypothetical protein
UPF0210 protein BLGT_02665 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_060_057G1_scaffold_1783_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1980..2642)
DNA (663bp) protein (221aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=12 Tax=Bifidobacterium RepID=B3DTE5_BIFLD
cspR; cspr
L3_060_057G1_scaffold_1783_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2663..3625
DNA (963bp) protein (321aa)
mutY; A/G-specific adenine DNA glycosylase (EC:3.2.2.-)
A/G-specific adenine DNA glycosylase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y294_BIFBU
Adenine glycosylase {ECO:0000313|EMBL:KEY23329.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_060_057G1_scaffold_1783_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3796..4608
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=H3L1M2_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95194.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_060_057G1_scaffold_1783_6
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4851..6077
DNA (1227bp) protein (409aa)
Filamentation induced by cAMP protein fic {ECO:0000313|EMBL:KFI87994.1}; EC=2.7.7.- {ECO:0000313|EMBL:KFI87994.1};; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
Filamentation induced by cAMP protein Fic n=1 Tax=Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM 20104 / JCM 1190 / R101-8) RepID=I1W7P6_BIFAR
filamentation induced by cAMP protein fic
L3_060_057G1_scaffold_1783_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6080..9244
DNA (3165bp) protein (1055aa)
hypothetical protein n=1 Tax=Bifidobacterium minimum RepID=UPI0003B6A9DD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32013.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
CRISPR-associated helicase Cas3 family protein
L3_060_057G1_scaffold_1783_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9234..10139
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R494_BIFLM
CRISPR-associated protein Cse1 {ECO:0000313|EMBL:KFI94762.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
Displaying 8 items

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