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L3_060_057G1_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_81_1
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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52..627
DNA (576bp) protein (192aa)
Transposase n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MWR2_9FIRM
Transposase {ECO:0000313|EMBL:EGS30646.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
hypothetical protein
L3_060_057G1_scaffold_81_2
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

669..1469
DNA (801bp) protein (267aa)
Integrase core domain protein n=3 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MRK7_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EGS29689.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
integrase core domain protein
L3_060_057G1_scaffold_81_3
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1598..2602
DNA (1005bp) protein (335aa)
Tyrosine recombinase XerC n=1 Tax=Peptoniphilus sp. oral taxon 836 str. F0141 RepID=D8FGK9_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
xerC; Tyrosine recombinase XerC
L3_060_057G1_scaffold_81_4
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2971..3228)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX84_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EGS31274.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
AbrB family transcriptional regulator
L3_060_057G1_scaffold_81_5
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3821..4177)
DNA (357bp) protein (119aa)
Protein containing LysM repeats n=1 Tax=Veillonella sp. CAG:933 RepID=R5BPC8_9FIRM
Protein containing LysM repeats {ECO:0000313|EMBL:CCX54587.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L3_060_057G1_scaffold_81_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4352..4975
DNA (624bp) protein (208aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYK8_9FIRM
L3_060_057G1_scaffold_81_7
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5114..6679
DNA (1566bp) protein (522aa)
M protein trans-acting positive regulator (MGA) n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTY6_9FIRM
M protein trans-acting positive regulator (MGA) {ECO:0000313|EMBL:EFA89979.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
L3_060_057G1_scaffold_81_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6729..7958)
DNA (1230bp) protein (410aa)
Aluminum resistance protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF10944.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
ynbB; putative protein YnbB
L3_060_057G1_scaffold_81_9
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7927..8865)
DNA (939bp) protein (313aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
tRNA dimethylallyltransferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYR3_9FIRM
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
L3_060_057G1_scaffold_81_10
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8862..10712)
DNA (1851bp) protein (617aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UC16_9FIRM
DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
L3_060_057G1_scaffold_81_11
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10705..13266)
DNA (2562bp) protein (854aa)
DNA mismatch repair protein MutS n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N5Y8_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
mutS; DNA mismatch repair protein MutS
L3_060_057G1_scaffold_81_12
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13253..14629)
DNA (1377bp) protein (459aa)
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Peptoniphilus lacrimalis RepID=UPI00037D82CB
L3_060_057G1_scaffold_81_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14726..15271)
DNA (546bp) protein (182aa)
Rubrerythrin n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MT24_9FIRM
Rubrerythrin-2 {ECO:0000313|EMBL:KGF10937.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
rubrerythrin
L3_060_057G1_scaffold_81_14
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15368..16435)
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7UUR4_9FIRM
prfA; Peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_060_057G1_scaffold_81_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16428..17252)
DNA (825bp) protein (275aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Release factor glutamine methyltransferase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E629_GEOLS
protein-(glutamine-N5) methyltransferase
L3_060_057G1_scaffold_81_16
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17243..18169)
DNA (927bp) protein (309aa)
PF07136 family protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UEK4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ75008.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_060_057G1_scaffold_81_17
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18220..18420)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=2 Tax=Peptoniphilus RepID=D1VSG1_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
hypothetical protein
L3_060_057G1_scaffold_81_18
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18501..19469)
DNA (969bp) protein (323aa)
glpX; Fructose-1,6-bisphosphatase class 2 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=2 Tax=Peptoniphilus RepID=E0NMU0_9FIRM
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
L3_060_057G1_scaffold_81_19
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19462..20118)
DNA (657bp) protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
tal; transaldolase Tal (EC:2.2.1.2)
Fructose-6-phosphate aldolase n=2 Tax=unclassified Eubacteriaceae RepID=V9HJN3_9FIRM
L3_060_057G1_scaffold_81_20
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20118..20975)
DNA (858bp) protein (286aa)
Fructose-bisphosphate aldolase class II {ECO:0000313|EMBL:EOD01913.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EOD01913.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
fba; fructose-1,6-bisphosphate aldolase Fba (EC:4.1.2.13)
Fructose-bisphosphate aldolase class II n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXJ4_9CLOT
L3_060_057G1_scaffold_81_21
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20977..21465)
DNA (489bp) protein (163aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4P8_9CLOT
Bifunctional enzyme IspD/IspF {ECO:0000256|SAAS:SAAS00096235}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_060_057G1_scaffold_81_22
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21462..22163)
DNA (702bp) protein (234aa)
ispD; 4-diphosphocytidyl-2-C-methyl-D-erythritolsynthase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288D597
L3_060_057G1_scaffold_81_23
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22156..23610)
DNA (1455bp) protein (485aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MT12_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EGS31641.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
ftsI; cell division protein FtsI/penicillin-binding protein 2
L3_060_057G1_scaffold_81_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23591..24859)
DNA (1269bp) protein (423aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MT11_9FIRM
Cell cycle protein {ECO:0000313|EMBL:KGF10927.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
cell cycle protein, FtsW/RodA/SpoVE family
L3_060_057G1_scaffold_81_25
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24864..25301)
DNA (438bp) protein (146aa)
FHA domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MT10_9FIRM
FHA domain protein {ECO:0000313|EMBL:EGS31446.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
FHA domain protein
L3_060_057G1_scaffold_81_26
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25433..26035
DNA (603bp) protein (201aa)
Regulatory protein RecX n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7UVP6_9FIRM
hypothetical protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
L3_060_057G1_scaffold_81_27
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26023..26310
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DC99_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EMT51038.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
hypothetical protein
L3_060_057G1_scaffold_81_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26288..27076
DNA (789bp) protein (263aa)
membrane protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FCEF37
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33102.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative membrane protein
L3_060_057G1_scaffold_81_29
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27078..27557
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MT05_9FIRM
Membrane protein {ECO:0000313|EMBL:KGF10922.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
L3_060_057G1_scaffold_81_30
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27616..28032)
DNA (417bp) protein (139aa)
polyunsaturated fatty acid synthase PfaC n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002899BCD
Positive regulator of sigma(E), RseC/MucC {ECO:0000313|EMBL:EFA90537.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
Positive regulator of sigma E, RseC/MucC
Displaying items 1-30 of 109 in total

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