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L3_060_057G1_scaffold_807

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_057G1_scaffold_807_1
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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433..1089
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MWZ3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EGS31599.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
hypothetical protein
L3_060_057G1_scaffold_807_2
unknown

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1126..1683
DNA (558bp) protein (186aa)

This feature has no annotations

L3_060_057G1_scaffold_807_3
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2026..3996
DNA (1971bp) protein (657aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
metG; Methionine-tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7V065_9FIRM
L3_060_057G1_scaffold_807_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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4005..4778
DNA (774bp) protein (258aa)
yabD; putative deoxyribonuclease YabD (EC:3.1.21.-)
Hydrolase, TatD family n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MV65_9FIRM
Hydrolase TatD {ECO:0000313|EMBL:KGF10848.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_060_057G1_scaffold_807_5
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4766..5314
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
Ribonuclease M5 n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UH98_9FIRM
primase/topoisomerase-like protein
L3_060_057G1_scaffold_807_6
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5307..6179
DNA (873bp) protein (291aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 386 str. F0131.;"
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N824_9FIRM
L3_060_057G1_scaffold_807_7
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6179..6517
DNA (339bp) protein (113aa)
Sugar-specific transcriptional regulator, TrmB family n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MV68_9FIRM
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EGS29990.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
hypothetical protein
L3_060_057G1_scaffold_807_8
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6581..6811
DNA (231bp) protein (77aa)
YruB family protein n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7UXE9_9FIRM
YruB family protein {ECO:0000313|EMBL:ERT64122.1}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
glutaredoxin
L3_060_057G1_scaffold_807_9
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6956..7828
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Bacillus megaterium (strain ATCC 12872 / QMB1551) RepID=D5DRL3_BACMQ
YpuA family protein
YpuA family protein {ECO:0000313|EMBL:CDZ75565.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_060_057G1_scaffold_807_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7891..8088)
DNA (198bp) protein (66aa)
Putative lipoprotein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MSS6_9FIRM
Disulfide oxidoreductase {ECO:0000313|EMBL:KGF11594.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hybrid cluster protein-associated redox disulfide domain-containing protein
L3_060_057G1_scaffold_807_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8149..8385)
DNA (237bp) protein (79aa)
Glutaredoxin n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZW0_9FIRM
Glutaredoxin {ECO:0000313|EMBL:EFR32603.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutaredoxin
L3_060_057G1_scaffold_807_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8532..9038
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF07390.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
L3_060_057G1_scaffold_807_13
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9063..9482
DNA (420bp) protein (140aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GXT2_9FIRM
peptide methionine sulfoxide reductase
L3_060_057G1_scaffold_807_14
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9552..11807
DNA (2256bp) protein (752aa)
ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA (EC:3.1.3.5)
5'-nucleotidase, C-terminal domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MVF5_9FIRM
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EGS29945.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
L3_060_057G1_scaffold_807_15
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12032..12298
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Peptoniphilus RepID=D1VV76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFK39373.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
hypothetical protein
L3_060_057G1_scaffold_807_16
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12341..13189
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NNQ8_9FIRM
L3_060_057G1_scaffold_807_17
unknown

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13158..13799
DNA (642bp) protein (214aa)

This feature has no annotations

L3_060_057G1_scaffold_807_18
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14298..14912
DNA (615bp) protein (205aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UQC5_9FIRM
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERT61530.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
L3_060_057G1_scaffold_807_19
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15018..16787
DNA (1770bp) protein (590aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UQ14_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERT61537.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
ABC transporter permease
L3_060_057G1_scaffold_807_20
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16784..18508
DNA (1725bp) protein (575aa)
ABC transporter, ATP-binding protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MXM8_FINMA
ABC transporter permease {ECO:0000313|EMBL:KGF33200.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
ABC transporter permease
L3_060_057G1_scaffold_807_21
Anaerococcus lactolyticus, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18534..19124
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BCW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEI87158.1}; TaxID=525254 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus lactolyticus ATCC 51172.;"
membrane protein
L3_060_057G1_scaffold_807_22
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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19124..19852
DNA (729bp) protein (243aa)
Cobalt transport protein n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NMA1_9FIRM
Transporter {ECO:0000313|EMBL:KGF09158.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
hypothetical protein
L3_060_057G1_scaffold_807_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19849..21231
DNA (1383bp) protein (461aa)
ABC transporter, ATP-binding protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MXM5_FINMA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGS35268.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
ABC transporter ATP-binding protein
L3_060_057G1_scaffold_807_24
unknown

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comp(21202..21531)
DNA (330bp) protein (110aa)

This feature has no annotations

Displaying 24 items

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