ggKbase home page

L3_060_144G1_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 245 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_144G1_scaffold_10_1
unknown

Not on your lists

3..155
DNA (153bp) protein (51aa)

This feature has no annotations

L3_060_144G1_scaffold_10_2
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

184..615
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PYJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28650.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_144G1_scaffold_10_3
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

710..2869
DNA (2160bp) protein (720aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
UvrD/REP helicase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QCY8_9FIRM
DNA/RNA helicase
L3_060_144G1_scaffold_10_4
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(2959..3147)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PW71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28653.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_144G1_scaffold_10_5
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(3487..4380)
DNA (894bp) protein (298aa)
DegV family protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q6N9_9FIRM
DegV family protein {ECO:0000313|EMBL:CDC28654.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
degV family protein
L3_060_144G1_scaffold_10_6
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

4778..5860
DNA (1083bp) protein (361aa)
PilT protein domain protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QCZ1_9FIRM
PilT protein domain protein {ECO:0000313|EMBL:CDC28656.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
twitching motility protein PilT
L3_060_144G1_scaffold_10_7
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

5919..6620
DNA (702bp) protein (234aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PW74_9FIRM
L3_060_144G1_scaffold_10_8
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

6617..7084
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Ribonuclease H n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QCZ4_9FIRM
rnhA; ribonuclease h
L3_060_144G1_scaffold_10_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7225..7425
DNA (201bp) protein (67aa)
Major cold shock protein n=2 Tax=Firmicutes RepID=R6Q6Q0_9FIRM
Major cold shock protein {ECO:0000313|EMBL:CDD60962.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
major cold shock protein
L3_060_144G1_scaffold_10_10
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

7646..9475
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q6Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28669.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
typA; GTP-binding protein TypA
L3_060_144G1_scaffold_10_11
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

9506..11137
DNA (1632bp) protein (544aa)
Polysaccharide biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PYK6_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC28670.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Polysaccharide biosynthesis protein
L3_060_144G1_scaffold_10_12
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

11277..13163
DNA (1887bp) protein (629aa)
UvrABC system protein C n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ACZ6_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
excinuclease ABC, C subunit
L3_060_144G1_scaffold_10_13
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

13177..14109
DNA (933bp) protein (311aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
HPr kinase/phosphorylase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QD33_9FIRM
HPr kinase
L3_060_144G1_scaffold_10_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

14113..15024
DNA (912bp) protein (304aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PYP7_9FIRM
UDP-N-acetylenolpyruvoylglucosamine reductase
L3_060_144G1_scaffold_10_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

15052..15924
DNA (873bp) protein (291aa)
UPF0042 nucleotide-binding protein BN668_00634 n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R2Z5_9FIRM
Nucleotide-binding protein BN668_00634 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_144G1_scaffold_10_16
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15954..16925
DNA (972bp) protein (324aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. CAG:505 RepID=R7AKM5_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_144G1_scaffold_10_17
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16922..17164
DNA (243bp) protein (81aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B842_9CLOT
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:CDD61367.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
phosphotransferase system HPr (HPr) family protein
L3_060_144G1_scaffold_10_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

17391..17879
DNA (489bp) protein (163aa)
Citrulline cluster-linked protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QD48_9FIRM
Citrulline cluster-linked protein {ECO:0000313|EMBL:CDC28721.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
citrulline cluster-linked gene
L3_060_144G1_scaffold_10_19
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

17986..18930
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PWC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28723.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_144G1_scaffold_10_20
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

19367..20347
DNA (981bp) protein (327aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PYR3_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDC28725.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative ABC transporter substrate-binding protein
L3_060_144G1_scaffold_10_21
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

20376..21269
DNA (894bp) protein (298aa)
Putative ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R310_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CDC28727.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative ABC transporter permease protein
L3_060_144G1_scaffold_10_22
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

21262..22035
DNA (774bp) protein (258aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PWD4_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC28728.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative ABC transporter ATP-binding protein
L3_060_144G1_scaffold_10_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(22098..22742)
DNA (645bp) protein (215aa)
Esterase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q6V5_9FIRM
Esterase {ECO:0000313|EMBL:CDC28729.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
lysophospholipase L1-like esterase
L3_060_144G1_scaffold_10_24
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(22802..23539)
DNA (738bp) protein (246aa)
Accessory gene regulator protein A n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PYR9_9FIRM
Accessory gene regulator protein A {ECO:0000313|EMBL:CDC28730.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_144G1_scaffold_10_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

23660..24625
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QD57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28731.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
stage III sporulation protein AA
L3_060_144G1_scaffold_10_26
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

24598..25116
DNA (519bp) protein (173aa)
Stage III sporulation protein AB n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R314_9FIRM
Stage III sporulation protein AB {ECO:0000313|EMBL:CDC28732.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_144G1_scaffold_10_27
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

25135..25329
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PWE1_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:CDC28733.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
stage III sporulation protein AC
L3_060_144G1_scaffold_10_28
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

25342..25725
DNA (384bp) protein (128aa)
Hypothetical membrane protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q6V7_9FIRM
Hypothetical membrane protein {ECO:0000313|EMBL:CDC28734.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_144G1_scaffold_10_29
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

25740..26855
DNA (1116bp) protein (372aa)
Stage III sporulation protein AE n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ABQ4_9FIRM
Stage III sporulation protein AE {ECO:0000313|EMBL:CCX40665.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
stage III sporulation protein AE
L3_060_144G1_scaffold_10_30
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

26872..27324
DNA (453bp) protein (151aa)
Sporulation stage III protein AF n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PTF2_9FIRM
Sporulation stage III protein AF {ECO:0000313|EMBL:CDC27703.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
stage III sporulation protein AF
Displaying items 1-30 of 245 in total

View Taxonomy