ggKbase home page

L3_060_144G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 324 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_144G1_scaffold_12_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2..163
DNA (162bp) protein (54aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=6 Tax=Erysipelotrichaceae RepID=B0N3U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47920.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Lycopene beta/epsilon cyclase family protein
L3_060_144G1_scaffold_12_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(214..1773)
DNA (1560bp) protein (520aa)
Chloride transporter, ClC family n=4 Tax=Erysipelotrichaceae RepID=B0N3U1_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EDS19113.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Group I intron
L3_060_144G1_scaffold_12_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1899..2354
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N3U2_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ36634.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hpr; HTH-type transcriptional regulator Hpr
L3_060_144G1_scaffold_12_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2528..3157)
DNA (630bp) protein (210aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91597.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
comFC; putative competence protein ComFC
L3_060_144G1_scaffold_12_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3124..4227)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=H1AGF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36632.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L3_060_144G1_scaffold_12_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4498..4695
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47925.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cold-shock DNA-binding domain-containing protein
L3_060_144G1_scaffold_12_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4795..7428
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=5 Tax=Erysipelotrichaceae RepID=B0N3U6_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
secA1; Protein translocase subunit SecA 1
L3_060_144G1_scaffold_12_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7428..8525
DNA (1098bp) protein (366aa)
Peptide chain release factor 2 n=5 Tax=Erysipelotrichaceae RepID=B0N3U7_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
prfB; peptide chain release factor 2, programmed frameshift
L3_060_144G1_scaffold_12_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8539..9396
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9R1H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36627.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_060_144G1_scaffold_12_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9442..9657)
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36626.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_060_144G1_scaffold_12_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9844..10527
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=4 Tax=Erysipelotrichaceae RepID=B0N3V0_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHQ47930.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
cell division ATP-binding protein FtsE
L3_060_144G1_scaffold_12_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10527..11438
DNA (912bp) protein (304aa)
Cell division protein FtsX n=2 Tax=Erysipelotrichaceae RepID=B0N3V1_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ftsX; cell division protein
L3_060_144G1_scaffold_12_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11478..12167
DNA (690bp) protein (230aa)
Acetyltransferase, GNAT family n=3 Tax=Erysipelotrichaceae RepID=B0N3V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91606.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
GCN5-like N-acetyltransferase
L3_060_144G1_scaffold_12_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12183..13553
DNA (1371bp) protein (457aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47933.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transglutaminase
L3_060_144G1_scaffold_12_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13616..13867
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36622.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_060_144G1_scaffold_12_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14009..15766)
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47935.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_060_144G1_scaffold_12_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15884..16714
DNA (831bp) protein (277aa)
Transcriptional regulator, MerR family n=4 Tax=Erysipelotrichaceae RepID=B0N3V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47936.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_060_144G1_scaffold_12_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16787..17824
DNA (1038bp) protein (346aa)
Dihydrodipicolinate reductase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91611.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
dihydrodipicolinate reductase
L3_060_144G1_scaffold_12_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17930..18247
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=5 Tax=Erysipelotrichaceae RepID=B0N3V8_9FIRM
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCZ36618.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative transcriptional regulator
L3_060_144G1_scaffold_12_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18603..19895
DNA (1293bp) protein (431aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R1I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36617.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_060_144G1_scaffold_12_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20234..20368
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36616.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_060_144G1_scaffold_12_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20365..20646
DNA (282bp) protein (94aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36615.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_060_144G1_scaffold_12_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20610..21224
DNA (615bp) protein (205aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RLL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47942.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
manganese containing catalase
L3_060_144G1_scaffold_12_24
unknown

Not on your lists

21178..21336
DNA (159bp) protein (53aa)

This feature has no annotations

L3_060_144G1_scaffold_12_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21968..23563
DNA (1596bp) protein (532aa)
ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N3W5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS19137.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
ABC transporter ATPase
L3_060_144G1_scaffold_12_26
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23627..24388
DNA (762bp) protein (254aa)
Nitroreductase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36611.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
nitroreductase
L3_060_144G1_scaffold_12_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24516..24944
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N3W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36610.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Transcriptional regulators
L3_060_144G1_scaffold_12_28
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25000..26733
DNA (1734bp) protein (578aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47946.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_060_144G1_scaffold_12_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26750..28588
DNA (1839bp) protein (613aa)
ABC transporter, ATP-binding protein n=3 Tax=Erysipelotrichaceae RepID=B0N3W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91621.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
multidrug ABC transporter ATPase
L3_060_144G1_scaffold_12_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28616..28894)
DNA (279bp) protein (93aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31736.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein predicted by Glimmer/Critica
Displaying items 1-30 of 324 in total

View Taxonomy