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L3_060_144G1_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_144G1_scaffold_83_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(225..323)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LMH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET58174.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_060_144G1_scaffold_83_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(320..1372)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LMH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET58173.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_060_144G1_scaffold_83_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2064..5111)
DNA (3048bp) protein (1016aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XI16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19057.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_060_144G1_scaffold_83_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5108..5914)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XI15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19056.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_060_144G1_scaffold_83_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6001..7485)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=A8RUN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15897.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
N-6 DNA methylase
L3_060_144G1_scaffold_83_6
unknown

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comp(7486..8151)
DNA (666bp) protein (222aa)

This feature has no annotations

L3_060_144G1_scaffold_83_7
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8152..9372)
DNA (1221bp) protein (407aa)
Type I restriction-modification system specificity subunit n=1 Tax=Streptococcus salivarius K12 RepID=J7SHM5_STRSL
Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:EJO15312.1}; TaxID=1200793 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius K12.;"
type I site-specific deoxyribonuclease
L3_060_144G1_scaffold_83_8
unknown

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comp(9411..10121)
DNA (711bp) protein (237aa)

This feature has no annotations

L3_060_144G1_scaffold_83_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10124..12874)
DNA (2751bp) protein (917aa)
Type I restriction enzyme R subunit n=10 Tax=Clostridium RepID=N9YI40_9CLOT
Type I restriction enzyme R subunit {ECO:0000313|EMBL:ENZ10532.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
type III restriction protein res subunit
L3_060_144G1_scaffold_83_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12981..13871)
DNA (891bp) protein (297aa)
Filamentation induced by cAMP protein Fic n=2 Tax=unclassified Lachnospiraceae RepID=E5XI10_9FIRM
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EFV19051.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_060_144G1_scaffold_83_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13906..14523)
DNA (618bp) protein (206aa)
cell division protein Fic n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FFFBEC
Protein involved in cell division
Protein involved in cell division {ECO:0000313|EMBL:CBL40317.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_060_144G1_scaffold_83_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15024..15332)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49668.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_060_144G1_scaffold_83_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15604..16782)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37925.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_144G1_scaffold_83_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16737..17339)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37926.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Methyltransferase domain.
L3_060_144G1_scaffold_83_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17364..17750)
DNA (387bp) protein (129aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A591_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37927.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_83_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17772..20729)
DNA (2958bp) protein (986aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37928.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
DNA or RNA helicases of superfamily II
L3_060_144G1_scaffold_83_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20853..21512)
DNA (660bp) protein (220aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z2V2_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDD37929.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC transporter ATP-binding protein
L3_060_144G1_scaffold_83_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21513..22739)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37930.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC transporter permease protein
L3_060_144G1_scaffold_83_19
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22758..23135)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWU6_CLOSD
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20911.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L3_060_144G1_scaffold_83_20
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23317..24738)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
putative two-component histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BDT3_9FIRM
L3_060_144G1_scaffold_83_21
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24731..25420)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B7Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ36501.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_060_144G1_scaffold_83_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25763..26992)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A596_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37932.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ssuA2; aliphatic sulfonates ABC transporter substrate-binding protein SsuA
L3_060_144G1_scaffold_83_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27061..27834)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37933.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_060_144G1_scaffold_83_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27834..28907)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z2V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37934.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ssuC2; aliphatic sulfonates ABC transporter permease SsuC
L3_060_144G1_scaffold_83_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29275..30132)
DNA (858bp) protein (286aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVJ6_9CLOT
FKBP-type peptidyl-prolyl cis-trans isomerases 2
L3_060_144G1_scaffold_83_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30342..31073
DNA (732bp) protein (244aa)
LytTr DNA-binding region n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAK5_9CLOT
LytTr DNA-binding region {ECO:0000313|EMBL:CDD37936.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LytTr DNA-binding protein
L3_060_144G1_scaffold_83_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31087..32874
DNA (1788bp) protein (596aa)
Putative sensor histidine kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPN9_9CLOT
Putative sensor histidine kinase {ECO:0000313|EMBL:CDD37938.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L3_060_144G1_scaffold_83_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33025..33504
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z2W2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37939.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_144G1_scaffold_83_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33540..34886
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37940.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
natural resistance-associated macrophage protein
L3_060_144G1_scaffold_83_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34886..35116
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37941.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Displaying items 1-30 of 93 in total

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