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L3_060_144G1_scaffold_430

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_144G1_scaffold_430_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(178..1890)
DNA (1713bp) protein (571aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMP5_9CLOT
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CDD42261.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type oligopeptide transport system, periplasmic component
L3_060_144G1_scaffold_430_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1977..3038)
DNA (1062bp) protein (354aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFM8_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD42259.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L3_060_144G1_scaffold_430_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3038..4042)
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMP0_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD42256.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L3_060_144G1_scaffold_430_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4056..5096)
DNA (1041bp) protein (347aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFM4_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CDD42254.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_060_144G1_scaffold_430_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5110..6027)
DNA (918bp) protein (306aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z1P3_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CDD42253.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_060_144G1_scaffold_430_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6192..7124)
DNA (933bp) protein (311aa)
Elongation factor Ts n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI26_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
translation elongation factor Ts (EF-Ts)
L3_060_144G1_scaffold_430_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7248..7982)
DNA (735bp) protein (245aa)
30S ribosomal protein S2 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMN5_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
SSU ribosomal protein S2P
L3_060_144G1_scaffold_430_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8358..9944)
DNA (1587bp) protein (529aa)
Sulfite reductase, beta subunit (hemoprotein) (EC:1.7.7.1)
Nitrite/sulfite reductase ferredoxin domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7R6_9CLOT
Nitrite/sulfite reductase ferredoxin domain protein {ECO:0000313|EMBL:CDD42250.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_430_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10139..11059
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFL9_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD42249.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L3_060_144G1_scaffold_430_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11062..12063)
DNA (1002bp) protein (334aa)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z1N9_9CLOT
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CDD42248.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L3_060_144G1_scaffold_430_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12035..13783)
DNA (1749bp) protein (583aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI21_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CDD42247.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type Fe3+ transport system, permease component
L3_060_144G1_scaffold_430_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13791..14915)
DNA (1125bp) protein (375aa)
ABC-type Fe3+ transport system periplasmic component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMM9_9CLOT
ABC-type Fe3+ transport system periplasmic component {ECO:0000313|EMBL:CDD42246.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type Fe3+ transport system, periplasmic component
L3_060_144G1_scaffold_430_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15247..15876
DNA (630bp) protein (210aa)
Predicted metal-dependent phosphoesterases (PHP family) n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFL4_9CLOT
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CDD42244.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_060_144G1_scaffold_430_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16028..17650)
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI16_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
chaperonin GroL
L3_060_144G1_scaffold_430_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17720..18004)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7Q8_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Co-chaperonin GroES (HSP10)
L3_060_144G1_scaffold_430_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18512..18961
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AI11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD42237.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_144G1_scaffold_430_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18980..19741
DNA (762bp) protein (254aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7Q2_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD42235.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L3_060_144G1_scaffold_430_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19933..21081)
DNA (1149bp) protein (383aa)
2-hydroxyglutaryl-CoA dehydratase beta subunit (EC:4.2.1.-)
2-hydroxyglutaryl-CoA dehydratase beta subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEI2_9CLOT
2-hydroxyglutaryl-CoA dehydratase beta subunit {ECO:0000313|EMBL:CDD39366.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_430_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21086..22522)
DNA (1437bp) protein (479aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB n=1 Tax=Clostridium sp. CAG:299 RepID=R6YTQ9_9CLOT
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB {ECO:0000313|EMBL:CDD39368.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L3_060_144G1_scaffold_430_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22553..23341)
DNA (789bp) protein (263aa)
2-hydroxyglutaryl-CoA dehydratase activator protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z753_9CLOT
2-hydroxyglutaryl-CoA dehydratase activator protein {ECO:0000313|EMBL:CDD39369.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
2-hydroxyglutaryl-CoA dehydratase activator protein
L3_060_144G1_scaffold_430_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23650..25416)
DNA (1767bp) protein (589aa)
glutaconyl-CoA decarboxylase alpha subunit (EC:4.1.1.70)
Glutaconyl-CoA decarboxylase alpha subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6YZI2_9CLOT
Glutaconyl-CoA decarboxylase alpha subunit {ECO:0000313|EMBL:CDD39370.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_430_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25534..26343)
DNA (810bp) protein (270aa)
glutaconate CoA-transferase subunit B (EC:2.8.3.12)
Glutaconate CoA-transferase subunit B n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEI7_9CLOT
Glutaconate CoA-transferase subunit B {ECO:0000313|EMBL:CDD39371.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_430_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26346..27308)
DNA (963bp) protein (321aa)
Glutaconate CoA-transferase subunit A n=1 Tax=Clostridium sp. CAG:299 RepID=R7A9E8_9CLOT
Glutaconate CoA-transferase subunit A {ECO:0000313|EMBL:CDD39372.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutaconate CoA transferase subunit A
L3_060_144G1_scaffold_430_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27428..28567)
DNA (1140bp) protein (380aa)
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.70 4.1.1.3)
Glutaconyl-CoA decarboxylase beta subunit {ECO:0000313|EMBL:CBK77198.1}; EC=4.1.1.3 {ECO:0000313|EMBL:CBK77198.1};; EC=4.1.1.70 {ECO:0000313|EMBL:CBK77198.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Glutaconyl-CoA decarboxylase beta subunit n=3 Tax=Clostridium RepID=D6DHM4_CLOSC
L3_060_144G1_scaffold_430_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28578..29021)
DNA (444bp) protein (148aa)
Biotin carboxyl carrier protein (EC:4.1.1.41 4.1.1.70)
Biotin carboxyl carrier protein {ECO:0000313|EMBL:CBK77197.1}; EC=4.1.1.41 {ECO:0000313|EMBL:CBK77197.1};; EC=4.1.1.70 {ECO:0000313|EMBL:CBK77197.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Biotin carboxyl carrier protein n=2 Tax=Clostridium RepID=D6DHM3_CLOSC
L3_060_144G1_scaffold_430_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29060..29452)
DNA (393bp) protein (131aa)
Biotin carboxyl carrier protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAE3_9CLOT
Biotin carboxyl carrier protein {ECO:0000313|EMBL:CDD39682.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Biotin carboxyl carrier protein
L3_060_144G1_scaffold_430_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29488..29778)
DNA (291bp) protein (97aa)
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUK7_9CLOT
Oxaloacetate decarboxylase gamma chain {ECO:0000313|EMBL:CDD39683.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Oxaloacetate decarboxylase, gamma chain.
L3_060_144G1_scaffold_430_28
unknown

Not on your lists

comp(30013..30135)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_060_144G1_scaffold_430_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30185..31882)
DNA (1698bp) protein (566aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutaminyl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z813_9CLOT
L3_060_144G1_scaffold_430_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32209..33165
DNA (957bp) protein (319aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0F9_9CLOT
Displaying items 1-30 of 35 in total

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