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L3_060_144G1_scaffold_745

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_144G1_scaffold_745_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27..164
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FG80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04517.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_060_144G1_scaffold_745_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

307..1152
DNA (846bp) protein (282aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQV9_9CLOT
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDD38368.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_060_144G1_scaffold_745_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1177..1869
DNA (693bp) protein (231aa)
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z470_9CLOT
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CDD38369.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_060_144G1_scaffold_745_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1859..2608
DNA (750bp) protein (250aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWR3_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD38370.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC transporter
L3_060_144G1_scaffold_745_5
unknown

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2832..2948
DNA (117bp) protein (39aa)

This feature has no annotations

L3_060_144G1_scaffold_745_6
unknown

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2900..3238
DNA (339bp) protein (113aa)

This feature has no annotations

L3_060_144G1_scaffold_745_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3384..4130
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YK28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64808.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Acetyltransferase (GNAT) family.
L3_060_144G1_scaffold_745_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4411..5238)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z474_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38374.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Site-specific recombinase XerD
L3_060_144G1_scaffold_745_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5239..6153)
DNA (915bp) protein (305aa)
Site-specific recombinase phage integrase family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWR7_9CLOT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDD38375.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Site-specific recombinase XerD
L3_060_144G1_scaffold_745_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6394..7989
DNA (1596bp) protein (532aa)
O-antigen polymerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBT0_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:CDD38376.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
O-Antigen ligase.
L3_060_144G1_scaffold_745_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8010..9863
DNA (1854bp) protein (618aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A6I5_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD38377.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted nucleoside-diphosphate sugar epimerases
L3_060_144G1_scaffold_745_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9881..10435)
DNA (555bp) protein (185aa)
Acetyltransferase (GNAT) family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQW8_9CLOT
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CDD38378.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Acetyltransferase (GNAT) family.
L3_060_144G1_scaffold_745_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10582..11565
DNA (984bp) protein (328aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBT6_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD38381.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Site-specific recombinase XerD
L3_060_144G1_scaffold_745_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11642..13093
DNA (1452bp) protein (484aa)
Chain length determinant protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQX3_9CLOT
Chain length determinant protein {ECO:0000313|EMBL:CDD38383.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_144G1_scaffold_745_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13228..13395
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38385.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_144G1_scaffold_745_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13596..13991)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A6J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38387.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_060_144G1_scaffold_745_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14266..15600)
DNA (1335bp) protein (445aa)
Putative cell wall binding repeat n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z488_9CLOT
Putative cell wall binding repeat {ECO:0000313|EMBL:CDD38389.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Putative cell wall binding repeat.
L3_060_144G1_scaffold_745_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15745..17376)
DNA (1632bp) protein (544aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
HMGL-like protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A6K1_9CLOT
HMGL-like protein {ECO:0000313|EMBL:CDD38392.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_745_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17382..18050)
DNA (669bp) protein (223aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:3.1.3.18)
HAD hydrolase family IA variant 3 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBV0_9CLOT
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDD38396.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_745_20
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18072..18815)
DNA (744bp) protein (248aa)
CMP-2-keto-3-deoxyoctulosonic acid synthetase (EC:2.7.7.38)
Putative 3-deoxy-D-manno-octulosonate cytidylyltransferase n=1 Tax=Clostridium sp. M62/1 RepID=D4CDJ0_9CLOT
Putative 3-deoxy-D-manno-octulosonate cytidylyltransferase {ECO:0000313|EMBL:EFE12205.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_060_144G1_scaffold_745_21
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19059..20984
DNA (1926bp) protein (642aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein n=2 Tax=Clostridium RepID=D4CDI9_9CLOT
Thiamine pyrophosphate enzyme N-terminal TPP binding domain protein {ECO:0000313|EMBL:CCY86068.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_060_144G1_scaffold_745_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21101..22042
DNA (942bp) protein (314aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFL6_9CLOT
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CDD39791.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Nucleoside-diphosphate-sugar epimerases
L3_060_144G1_scaffold_745_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22163..23218
DNA (1056bp) protein (352aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUW6_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDD39793.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_060_144G1_scaffold_745_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23208..25394
DNA (2187bp) protein (729aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAP4_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CDD39797.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted glycosyltransferases
L3_060_144G1_scaffold_745_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25434..26429
DNA (996bp) protein (332aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8B9_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CDD39799.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted glycosyltransferases
L3_060_144G1_scaffold_745_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26470..28677
DNA (2208bp) protein (736aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0R9_9CLOT
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CDD39800.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
cell envelope-related function transcriptional attenuator common domain
L3_060_144G1_scaffold_745_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28724..30142
DNA (1419bp) protein (473aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUX6_9CLOT
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDD39803.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Undecaprenyl-phosphate glucose phosphotransferase
L3_060_144G1_scaffold_745_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30157..32004
DNA (1848bp) protein (616aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEL0_CLOSC
cell envelope-related function transcriptional attenuator common domain
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CBK76134.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_060_144G1_scaffold_745_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32189..33052
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38661.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted transcriptional regulators
L3_060_144G1_scaffold_745_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33207..33482
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z521_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38659.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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