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L3_060_256G1_scaffold_2018

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_2018_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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436..747
DNA (312bp) protein (104aa)
Replication initiator protein A (RepA) N-terminus n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J5_9FIRM
Replication initiator protein A (RepA) N-terminus.
Replication initiator protein A (RepA) N-terminus {ECO:0000313|EMBL:CBL01158.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2018_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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753..932
DNA (180bp) protein (60aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCL2_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL01159.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2018_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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943..1470
DNA (528bp) protein (176aa)
Macro domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNA2_9FIRM
Macro domain protein {ECO:0000313|EMBL:EFQ05336.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L3_060_256G1_scaffold_2018_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1556..2221
DNA (666bp) protein (222aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNA3_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
sugar fermentation stimulation protein
L3_060_256G1_scaffold_2018_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2300..3025
DNA (726bp) protein (242aa)
Transcriptional regulator, MerR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E3_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBK98036.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2018_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3131..3508
DNA (378bp) protein (126aa)
desulfoferrodoxin ferrous iron-binding domain (EC:1.15.1.2)
Desulfoferrodoxin ferrous iron-binding domain {ECO:0000313|EMBL:CBK98037.1}; EC=1.15.1.2 {ECO:0000313|EMBL:CBK98037.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Desulfoferrodoxin ferrous iron-binding domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E4_9FIRM
L3_060_256G1_scaffold_2018_7

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3788..4129
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZE83_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S34763 {ECO:0000313|EMBL:GAG34078.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HipB; putative transcriptional regulator
L3_060_256G1_scaffold_2018_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4348..4647
DNA (300bp) protein (100aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H569_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU96987.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Helix-turn-helix.
L3_060_256G1_scaffold_2018_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4734..5195
DNA (462bp) protein (154aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E5_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK98038.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2018_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5180..5956
DNA (777bp) protein (259aa)
HAD hydrolase, family IIB n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNA7_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EFQ05341.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
HAD-superfamily hydrolase, subfamily IIB
L3_060_256G1_scaffold_2018_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6014..6463
DNA (450bp) protein (150aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K3E7_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EFQ05342.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_2018_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6476..7063
DNA (588bp) protein (196aa)
Uncharacterized low-complexity proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3E8_9FIRM
Uncharacterized low-complexity proteins
Uncharacterized low-complexity proteins {ECO:0000313|EMBL:CBK98041.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2018_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7076..7528
DNA (453bp) protein (151aa)
hypothetical protein (EC:3.1.1.29)
Putative aminoacyl-tRNA hydrolase n=2 Tax=root RepID=E2ZNB0_9FIRM
Putative aminoacyl-tRNA hydrolase {ECO:0000313|EMBL:EFQ05344.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_2018_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7609..7974)
DNA (366bp) protein (122aa)
Alpha/beta hydrolase fold n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3F0_9FIRM
alpha/beta hydrolase fold.
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CBK98043.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2018_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7989..8870)
DNA (882bp) protein (294aa)
Phage protein Gp37/Gp68 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNB2_9FIRM
Phage protein Gp37/Gp68 {ECO:0000313|EMBL:EFQ05346.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Gp37Gp68 family protein
L3_060_256G1_scaffold_2018_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8985..9098
DNA (114bp) protein (38aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8E3_9FIRM
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 {ECO:0000313|EMBL:CBL01106.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2018_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9130..9561
DNA (432bp) protein (144aa)
Macro domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H575_9FIRM
Macro domain protein {ECO:0000313|EMBL:EEU96993.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L3_060_256G1_scaffold_2018_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9786..11123
DNA (1338bp) protein (446aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C7XEQ6_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU49820.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_060_256G1_scaffold_2018_19
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11433..12311
DNA (879bp) protein (293aa)
Putative ribokinase n=1 Tax=Bulleidia extructa W1219 RepID=D2MNA6_9FIRM
Putative ribokinase {ECO:0000313|EMBL:EFC05928.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
PfkB domain-containing protein
L3_060_256G1_scaffold_2018_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12329..12766
DNA (438bp) protein (146aa)
Cysteine synthase n=2 Tax=root RepID=D4K3F3_9FIRM
Cysteine synthase
Cysteine synthase {ECO:0000313|EMBL:CBK98046.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 20 items

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