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L3_060_256G1_scaffold_2062

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_2062_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(84..401)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SCA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05766.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_060_256G1_scaffold_2062_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(477..1745)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H892_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95852.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_060_256G1_scaffold_2062_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1742..2440)
DNA (699bp) protein (233aa)
Response regulator of the LytR/AlgR family n=3 Tax=Faecalibacterium prausnitzii RepID=D4K8P7_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBL01210.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2062_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2620..3198
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06565.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Accessory gene regulator B.
L3_060_256G1_scaffold_2062_5
unknown

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3267..3401
DNA (135bp) protein (45aa)

This feature has no annotations

L3_060_256G1_scaffold_2062_6
unknown

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3480..3575
DNA (96bp) protein (32aa)

This feature has no annotations

L3_060_256G1_scaffold_2062_7
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3667..4413
DNA (747bp) protein (249aa)
Tat pathway signal sequence domain protein n=2 Tax=Faecalibacterium prausnitzii RepID=C7H887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EXG86050.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_060_256G1_scaffold_2062_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4445..4834
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20913.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_060_256G1_scaffold_2062_9
unknown

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5030..5545
DNA (516bp) protein (172aa)

This feature has no annotations

L3_060_256G1_scaffold_2062_10
unknown

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comp(5736..6092)
DNA (357bp) protein (119aa)

This feature has no annotations

L3_060_256G1_scaffold_2062_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6251..6511)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8K4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01167.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2062_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6597..6830)
DNA (234bp) protein (78aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXT4_9FIRM
L3_060_256G1_scaffold_2062_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6911..7690)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XER9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46300.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_060_256G1_scaffold_2062_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7683..7919)
DNA (237bp) protein (79aa)
Uncharacterized protein n=9 Tax=root RepID=A6NXT6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98808.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2062_15
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7936..10143)
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0Y304_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70295.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_060_256G1_scaffold_2062_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10143..10973)
DNA (831bp) protein (277aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
DNA modification methylase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium sp. M62/1 RepID=D4CBW8_9CLOT
L3_060_256G1_scaffold_2062_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11170..11763)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99109.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_060_256G1_scaffold_2062_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11779..12786)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99110.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
Displaying 18 items

View Taxonomy