ggKbase home page

L3_060_256G1_scaffold_2207

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_2207_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)
Sigma-70, region 4 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBF9_9FIRM
Sigma-70, region 4.
Sigma-70, region 4 {ECO:0000313|EMBL:CBL02172.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2207_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(608..1315)
DNA (708bp) protein (236aa)
Predicted Zn peptidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBF8_9FIRM
Predicted Zn peptidase
Predicted Zn peptidase {ECO:0000313|EMBL:CBL02171.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_2207_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1315..1596)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1H1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00120.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1622..1936)
DNA (315bp) protein (105aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1H0_9FIRM
Nucleotidyltransferase/DNA polymerase involved in DNA repair
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:CBL00119.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2138..2554
DNA (417bp) protein (139aa)
Predicted transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G9_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL00118.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2600..3112
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0BV68_9CLOT
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFE12984.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_060_256G1_scaffold_2207_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3186..3617)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00116.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3586..4014)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZH8_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJJ75219.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L3_060_256G1_scaffold_2207_9
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4527..4967
DNA (441bp) protein (147aa)
MobA/MobL family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6B3_9CLOT
MobA/MobL family protein {ECO:0000313|EMBL:EFE14101.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
plasmid mobilization system relaxase
L3_060_256G1_scaffold_2207_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4930..5160
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00115.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5371..6621)
DNA (1251bp) protein (417aa)
Major Facilitator Superfamily n=2 Tax=Faecalibacterium RepID=D4K1G5_9FIRM
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBL00114.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6787..7392)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00113.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7550..9193)
DNA (1644bp) protein (548aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G3_9FIRM
ABC-type multidrug transport system, ATPase and permease components
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBL00112.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9385..10317)
DNA (933bp) protein (311aa)
Integrase core domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEZ2_9CLOT
Integrase core domain protein {ECO:0000313|EMBL:EDO57743.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
integrase catalytic subunit
L3_060_256G1_scaffold_2207_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10933..11907)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G1_9FIRM
Domain of unknown function (DUF1814).
Uncharacterized protein {ECO:0000313|EMBL:CBL00110.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_2207_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11894..12346)
DNA (453bp) protein (151aa)
Predicted transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1G0_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL00109.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying 16 items

View Taxonomy