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L3_060_256G1_scaffold_2952

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_2952_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..563)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CD25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81918.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_060_256G1_scaffold_2952_2
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1471..2082)
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:KJD44892.1}; TaxID=159743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae.;"
L3_060_256G1_scaffold_2952_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2186..2617)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33693.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_060_256G1_scaffold_2952_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2700..3395)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33694.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_060_256G1_scaffold_2952_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3392..3925)
DNA (534bp) protein (178aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO33695.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase subunit sigma-24
L3_060_256G1_scaffold_2952_6
unknown

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comp(3950..4198)
DNA (249bp) protein (83aa)

This feature has no annotations

L3_060_256G1_scaffold_2952_7
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4198..4959)
DNA (762bp) protein (254aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CHZ2_9CLOT
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFE10679.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
CobQ/CobB/MinD/ParA nucleotide binding domain.
L3_060_256G1_scaffold_2952_8

Not on your lists

comp(5097..5297)
DNA (201bp) protein (67aa)
Uncharacterized protein (Fragment) n=1 Tax=gut metagenome RepID=J9F6A8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJW90426.1}; Flags: Fragment;; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L3_060_256G1_scaffold_2952_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5299..5529)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CD29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81923.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_060_256G1_scaffold_2952_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(5498..5692)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13479.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_060_256G1_scaffold_2952_11
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5696..5959)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Leptotrichia shahii RepID=UPI00037EA992
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:EJU28801.1}; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. CM52.;"
txe/YoeB family addiction module toxin
L3_060_256G1_scaffold_2952_12
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5949..6218)
DNA (270bp) protein (90aa)
Prevent-host-death family protein n=2 Tax=Oribacterium RepID=G9WP02_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EUB16801.1}; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
prevent-host-death family protein
L3_060_256G1_scaffold_2952_13
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6305..7711)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=6 Tax=root RepID=K0XME6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ68869.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
hypothetical protein
L3_060_256G1_scaffold_2952_14
unknown

Not on your lists

comp(8177..8422)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_060_256G1_scaffold_2952_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8434..9132)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M309_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62267.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_060_256G1_scaffold_2952_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9148..9705)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CD25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81918.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
Displaying 16 items

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