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L3_060_256G1_scaffold_1163

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_1163_1
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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784..1329
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6UA59_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU27420.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_060_256G1_scaffold_1163_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1459..1710)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95133.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_060_256G1_scaffold_1163_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2483..2890
DNA (408bp) protein (136aa)
Replication initiator protein A domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3G9_9FIRM
Replication initiator protein A domain protein {ECO:0000313|EMBL:EEU97534.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Replication initiator protein A (RepA) N-terminus.
L3_060_256G1_scaffold_1163_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3092..3601)
DNA (510bp) protein (170aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Ferritin-like protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6U7_9FIRM
Ferritin-like protein
L3_060_256G1_scaffold_1163_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3598..3777)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K7N1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00844.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_060_256G1_scaffold_1163_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4177..5106)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNG4_9FIRM
L3_060_256G1_scaffold_1163_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5121..5444)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTL9_9FIRM
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CBL41161.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_060_256G1_scaffold_1163_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5606..6787)
DNA (1182bp) protein (394aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNG6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFQ05210.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Uncharacterized flavoproteins
L3_060_256G1_scaffold_1163_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6915..7778)
DNA (864bp) protein (288aa)
Nitroreductase family protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNG7_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:EFQ05211.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Nitroreductase family.
L3_060_256G1_scaffold_1163_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7813..8856)
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Ribonucleotide reductase, beta subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNG8_9FIRM
L3_060_256G1_scaffold_1163_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8867..11383)
DNA (2517bp) protein (839aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=2 Tax=root RepID=E2ZNG9_9FIRM
L3_060_256G1_scaffold_1163_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11550..12761)
DNA (1212bp) protein (404aa)
Uncharacterized flavoproteins n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTL6_9FIRM
Uncharacterized flavoproteins
Uncharacterized flavoproteins {ECO:0000313|EMBL:CBL41158.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_060_256G1_scaffold_1163_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12785..14650)
DNA (1866bp) protein (622aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Rubredoxin n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNH1_9FIRM
Rubredoxin {ECO:0000313|EMBL:EFQ05215.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_060_256G1_scaffold_1163_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14673..15104)
DNA (432bp) protein (144aa)
Predicted transcriptional regulator n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTL4_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL41156.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_060_256G1_scaffold_1163_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15431..15805)
DNA (375bp) protein (125aa)
Putative superoxide reductase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNI2_9FIRM
Putative superoxide reductase {ECO:0000313|EMBL:EFQ05226.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Desulfoferrodoxin
L3_060_256G1_scaffold_1163_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15827..16324)
DNA (498bp) protein (166aa)
Rubredoxin n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4N8_9CLOT
Rubredoxin {ECO:0000313|EMBL:CDD59544.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Rubrerythrin
L3_060_256G1_scaffold_1163_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16449..16676)
DNA (228bp) protein (76aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNI4_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFQ05228.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_060_256G1_scaffold_1163_18
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(16751..17359)
DNA (609bp) protein (203aa)
Epoxide hydrolase domain-like phosphatase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ELM1_9FIRM
Epoxide hydrolase domain-like phosphatase {ECO:0000313|EMBL:CCX93328.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_060_256G1_scaffold_1163_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17435..18316)
DNA (882bp) protein (294aa)
Aldose 1-epimerase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGT8_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EFQ07531.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Galactose mutarotase and related enzymes
L3_060_256G1_scaffold_1163_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(18329..19576)
DNA (1248bp) protein (416aa)
Cell wall surface anchor family protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LM70_9FIRM
Cell wall surface anchor family protein {ECO:0000313|EMBL:CDB88523.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
cell wall surface anchor family protein
L3_060_256G1_scaffold_1163_21
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19597..20286)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NBC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80605.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_060_256G1_scaffold_1163_22
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20395..21084)
DNA (690bp) protein (230aa)
Metallo-beta-lactamase domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TBS6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ETO99019.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
L3_060_256G1_scaffold_1163_23
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21114..21986)
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4UAB3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EJP19142.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
ABC transporter permease
L3_060_256G1_scaffold_1163_24
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22002..22850)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B0G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90772.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
ABC transporter permease
L3_060_256G1_scaffold_1163_25
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22969..24300)
DNA (1332bp) protein (444aa)
ABC transporter, solute-binding protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GD40_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EJP19120.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
putative sugar ABC transporter sugar-binding protein
L3_060_256G1_scaffold_1163_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24752..25852)
DNA (1101bp) protein (367aa)
Phosphotransferase enzyme family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5Z5_9FIRM
Phosphotransferase enzyme family {ECO:0000313|EMBL:EEU96699.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphotransferase enzyme family.
L3_060_256G1_scaffold_1163_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25812..26777)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08019.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
dTDP-glucose pyrophosphorylase
L3_060_256G1_scaffold_1163_28
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26875..27705)
DNA (831bp) protein (277aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LZ90_9FIRM
Glycerophosphodiester phosphodiesterase domain protein {ECO:0000313|EMBL:ETO99037.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L3_060_256G1_scaffold_1163_29
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27875..30061
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63650.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Transcriptional regulators
L3_060_256G1_scaffold_1163_30
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30119..31120)
DNA (1002bp) protein (334aa)
Ser/Thr phosphatase family protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LZ88_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EHO49619.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
metallophosphoesterase
Displaying items 1-30 of 35 in total

View Taxonomy