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L3_060_256G1_scaffold_1361

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_1361_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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274..750
DNA (477bp) protein (159aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K075_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99674.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(808..1653)
DNA (846bp) protein (282aa)
EDD domain protein DegV family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q6N5_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDC28649.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
EDD domain protein, DegV family
L3_060_256G1_scaffold_1361_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1985..3370
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=root RepID=D4K074_9FIRM
L3_060_256G1_scaffold_1361_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3623..4177
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K073_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99672.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4334..5767)
DNA (1434bp) protein (478aa)
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Uronate isomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K072_9FIRM
L3_060_256G1_scaffold_1361_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6090..7604
DNA (1515bp) protein (505aa)
tagaturonate reductase (EC:1.1.1.58)
Tagaturonate reductase {ECO:0000313|EMBL:CBK99670.1}; EC=1.1.1.58 {ECO:0000313|EMBL:CBK99670.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Tagaturonate reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K071_9FIRM
L3_060_256G1_scaffold_1361_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7694..9184
DNA (1491bp) protein (497aa)
D-altronate dehydratase (EC:4.2.1.7)
D-altronate dehydratase {ECO:0000313|EMBL:CBK99669.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CBK99669.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
D-altronate dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K070_9FIRM
L3_060_256G1_scaffold_1361_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9359..9520
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K069_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99668.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9526..10407
DNA (882bp) protein (294aa)
Galactose mutarotase and related enzymes n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K068_9FIRM
Galactose mutarotase and related enzymes
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CBK99667.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10481..11182)
DNA (702bp) protein (234aa)
Transcriptional regulators n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K067_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK99666.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11312..11944)
DNA (633bp) protein (211aa)
PAP2 superfamily n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K066_9FIRM
PAP2 superfamily.
PAP2 superfamily {ECO:0000313|EMBL:CBK99665.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12088..13005
DNA (918bp) protein (306aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K065_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBK99664.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13193..14155
DNA (963bp) protein (321aa)
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14)
Entner-Doudoroff aldolase {ECO:0000313|EMBL:CBK99663.1}; EC=4.1.2.14 {ECO:0000313|EMBL:CBK99663.1};; EC=4.1.3.16 {ECO:0000313|EMBL:CBK99663.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Entner-Doudoroff aldolase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K064_9FIRM
L3_060_256G1_scaffold_1361_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14225..15250
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBK99662.1}; EC=2.7.1.45 {ECO:0000313|EMBL:CBK99662.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Sugar kinases, ribokinase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K063_9FIRM
L3_060_256G1_scaffold_1361_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15270..16118
DNA (849bp) protein (283aa)
4-deoxy-L-threo-5-hexulose uronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687, ECO:0000313|EMBL:CBK99661.1};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K062_9FIRM
L3_060_256G1_scaffold_1361_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16201..17001
DNA (801bp) protein (267aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBK99660.1}; EC=1.1.1.69 {ECO:0000313|EMBL:CBK99660.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=2 Tax=root RepID=D4K061_9FIRM
L3_060_256G1_scaffold_1361_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17188..17637)
DNA (450bp) protein (150aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K060_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBK99659.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17808..18131
DNA (324bp) protein (108aa)
Rhodanese-related sulfurtransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K059_9FIRM
Rhodanese-related sulfurtransferase
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18683..19120
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K058_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99657.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19263..20480
DNA (1218bp) protein (406aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes {ECO:0000313|EMBL:CBK99656.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CBK99656.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K057_9FIRM
L3_060_256G1_scaffold_1361_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20482..20931
DNA (450bp) protein (150aa)
FeS cluster assembly scaffold protein NifU, Clostridium type n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K056_9FIRM
FeS cluster assembly scaffold protein NifU, Clostridium type
FeS cluster assembly scaffold protein NifU, Clostridium type {ECO:0000313|EMBL:CBK99655.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21065..21859
DNA (795bp) protein (265aa)
Putative dipicolinic acid synthetase, A subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H3_9FIRM
Putative dipicolinic acid synthetase, A subunit {ECO:0000313|EMBL:EEU95425.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
L3_060_256G1_scaffold_1361_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21856..22446
DNA (591bp) protein (197aa)
Phosphopantothenoylcysteine synthetase/decarboxylase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K055_9FIRM
Phosphopantothenoylcysteine synthetase/decarboxylase
Phosphopantothenoylcysteine synthetase/decarboxylase {ECO:0000313|EMBL:CBK99654.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22520..23836
DNA (1317bp) protein (439aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K054_9FIRM
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBK99653.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24085..24651
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFQ06300.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EFQ06300.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K053_9FIRM
L3_060_256G1_scaffold_1361_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24676..25467
DNA (792bp) protein (264aa)
ABC-type polysaccharide/polyol phosphate export systems permease component n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q074_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_060_256G1_scaffold_1361_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25484..26227
DNA (744bp) protein (248aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=root RepID=D4K052_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBK99651.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26267..28114
DNA (1848bp) protein (616aa)
Predicted glycosyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K051_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CBK99650.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Predicted glycosyltransferases
L3_060_256G1_scaffold_1361_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28111..28647
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K050_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99649.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_060_256G1_scaffold_1361_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28786..28983)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K049_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99648.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 57 in total

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