ggKbase home page

L3_060_256G1_scaffold_1585

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_1585_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..809
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82851.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_060_256G1_scaffold_1585_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1674..2183
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000362E731
Uncharacterized protein {ECO:0000313|EMBL:EDM62757.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_060_256G1_scaffold_1585_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2278..3072
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YIP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ11753.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_060_256G1_scaffold_1585_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

3479..3931
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SCI7_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
single-strand binding protein
L3_060_256G1_scaffold_1585_5
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4069..4308
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MA31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99153.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
plasmid stabilization system
L3_060_256G1_scaffold_1585_6
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4319..4504
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WPN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05363.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_060_256G1_scaffold_1585_7
unknown

Not on your lists

comp(4488..5048)
DNA (561bp) protein (187aa)

This feature has no annotations

L3_060_256G1_scaffold_1585_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5785..6066
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82856.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_060_256G1_scaffold_1585_9
unknown

Not on your lists

6047..6475
DNA (429bp) protein (143aa)

This feature has no annotations

L3_060_256G1_scaffold_1585_10
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6518..8833
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GHJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB13692.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
cytosolic protein
L3_060_256G1_scaffold_1585_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8966..10042
DNA (1077bp) protein (359aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FM94_9CLOT
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEA82834.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPases involved in chromosome partitioning
L3_060_256G1_scaffold_1585_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10093..11139
DNA (1047bp) protein (349aa)
ParB-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM92_9CLOT
ParB-like protein {ECO:0000313|EMBL:EEA82871.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ParB-like nuclease domain.
L3_060_256G1_scaffold_1585_13
unknown

Not on your lists

11198..11551
DNA (354bp) protein (118aa)

This feature has no annotations

L3_060_256G1_scaffold_1585_14
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11587..12687
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N0R4_SLAHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV21142.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_060_256G1_scaffold_1585_15
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12708..13310
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TF26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC57317.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_060_256G1_scaffold_1585_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

13406..14023
DNA (618bp) protein (206aa)
Site-specific recombinases DNA invertase Pin homologs n=2 Tax=Firmicutes RepID=R5H8S4_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CCY26070.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_060_256G1_scaffold_1585_17
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14731..14994
DNA (264bp) protein (88aa)
Prevent-host-death family protein n=2 Tax=Coprococcus RepID=A8SVP5_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EDP25686.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L3_060_256G1_scaffold_1585_18
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14987..15289
DNA (303bp) protein (101aa)
Plasmid stabilization system protein, RelE/ParE family n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SSI3_9FIRM
Plasmid stabilization system protein, RelE/ParE family {ECO:0000313|EMBL:EDP26730.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
prophage LambdaSa04, RelE/ParE family protein
L3_060_256G1_scaffold_1585_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16110..16265
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82851.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying 19 items

View Taxonomy