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L3_060_256G1_scaffold_8

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Displaying items 1-30 of 269 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_8_1
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55..315
DNA (261bp) protein (87aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridiales RepID=N1ZVK6_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Single-strand binding protein family.
L3_060_256G1_scaffold_8_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

303..548
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90356.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_060_256G1_scaffold_8_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

687..1079
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90357.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
putative transcriptional regulator
L3_060_256G1_scaffold_8_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1052..1291
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90358.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
putative transcriptional regulator
L3_060_256G1_scaffold_8_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1778..2485)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90359.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
IS110 family transposase
L3_060_256G1_scaffold_8_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2504..2896)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90360.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
IS110 family transposase
L3_060_256G1_scaffold_8_7
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3240..3791)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90361.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_060_256G1_scaffold_8_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3995..4345
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mRNA interferase n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C7_9FIRM
hypothetical protein
L3_060_256G1_scaffold_8_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4603..4881
DNA (279bp) protein (93aa)
Prevent-host-death family protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C8_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EHM90363.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
prevent-host-death family protein
L3_060_256G1_scaffold_8_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4883..5200
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90364.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_060_256G1_scaffold_8_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6135..6329
DNA (195bp) protein (65aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4D0_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EHM90365.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_060_256G1_scaffold_8_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6340..7488
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R4D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90366.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Site-specific recombinase XerD
L3_060_256G1_scaffold_8_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7704..7820
DNA (117bp) protein (39aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=G9R4D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32079.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Transposase.
L3_060_256G1_scaffold_8_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7844..8107
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17501.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Transposase.
L3_060_256G1_scaffold_8_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8117..8353
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N6R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47282.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_060_256G1_scaffold_8_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8517..10262)
DNA (1746bp) protein (582aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase 1 (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Coprobacillus RepID=C3RKR2_9FIRM
L3_060_256G1_scaffold_8_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10563..11354)
DNA (792bp) protein (264aa)
Electron transport complex, RnfABCDGE type, B subunit n=4 Tax=Erysipelotrichaceae RepID=B0N6R6_9FIRM
Electron transport complex, rnfabcdge type, B subunit {ECO:0000313|EMBL:EHQ47280.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
electron transport complex, RnfABCDGE type, B subunit
L3_060_256G1_scaffold_8_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11370..11942)
DNA (573bp) protein (191aa)
Electron transport complex, RnfABCDGE type, A subunit n=5 Tax=Erysipelotrichaceae RepID=B0N6R7_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
electron transport complex, RnfABCDGE type, A subunit
L3_060_256G1_scaffold_8_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11943..12674)
DNA (732bp) protein (244aa)
Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Erysipelotrichaceae RepID=B0N6R8_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
RnfABCDGE type electron transport complex subunit E
L3_060_256G1_scaffold_8_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12667..13299)
DNA (633bp) protein (211aa)
Electron transport complex, rnfabcdge type, G subunit n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AKH2_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
electron transport complex, RnfABCDGE type, G subunit
L3_060_256G1_scaffold_8_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13299..14225)
DNA (927bp) protein (309aa)
Electron transport complex, rnfabcdge type, D subunit n=3 Tax=Coprobacillus RepID=G9R4D9_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
RnfABCDGE type electron transport complex subunit D
L3_060_256G1_scaffold_8_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14225..15553)
DNA (1329bp) protein (443aa)
Electron transport complex, rnfabcdge type, C subunit n=2 Tax=Coprobacillus RepID=C3RKR7_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
RnfABCDGE type electron transport complex subunit C
L3_060_256G1_scaffold_8_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15681..16265)
DNA (585bp) protein (195aa)
Rubrerythrin n=5 Tax=Erysipelotrichaceae RepID=B0N6S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35588.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rubrerythrin
L3_060_256G1_scaffold_8_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16402..16794)
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RKR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35587.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_060_256G1_scaffold_8_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16894..17793
DNA (900bp) protein (300aa)
CorA-like protein n=2 Tax=Erysipelotrichaceae RepID=B0N6S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47271.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Mg2 transporter protein CorA family protein
L3_060_256G1_scaffold_8_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


17955..18605
DNA (651bp) protein (217aa)
30S ribosomal protein S4 n=5 Tax=Erysipelotrichaceae RepID=B0N6S5_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
rpsD; 30S ribosomal protein S4
L3_060_256G1_scaffold_8_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18945..19652
DNA (708bp) protein (236aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=5 Tax=Erysipelotrichaceae RepID=B0N6S6_9FIRM
L3_060_256G1_scaffold_8_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19665..20297
DNA (633bp) protein (211aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N6S7_9FIRM
L3_060_256G1_scaffold_8_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20420..21241
DNA (822bp) protein (274aa)
ABC-2 type transporter n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6S8_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_060_256G1_scaffold_8_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21251..22078
DNA (828bp) protein (276aa)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N6S9_9FIRM
Teichoic acid export protein ATP-binding subunit {ECO:0000313|EMBL:CCZ33957.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
Displaying items 1-30 of 269 in total

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