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L3_060_256G1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_060_256G1_scaffold_34_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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186..1235
DNA (1050bp) protein (350aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Firmicutes RepID=R6QVU6_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
heat-inducible transcription repressor HrcA
L3_060_256G1_scaffold_34_2
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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1253..1810
DNA (558bp) protein (186aa)
Protein GrpE n=2 Tax=Firmicutes RepID=R6PNV8_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
heat shock protein GrpE
L3_060_256G1_scaffold_34_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1851..3686
DNA (1836bp) protein (612aa)
Chaperone protein DnaK n=1 Tax=Clostridium sp. CAG:505 RepID=R7BCV1_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
chaperone protein DnaK
L3_060_256G1_scaffold_34_4
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3787..4965
DNA (1179bp) protein (393aa)
Chaperone protein DnaJ n=2 Tax=Firmicutes RepID=R6PRB1_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
chaperone protein DnaJ
L3_060_256G1_scaffold_34_5
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5274..6170
DNA (897bp) protein (299aa)
Cation diffusion facilitator family transporter n=2 Tax=Firmicutes RepID=R6Q5J7_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDD62684.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
cation diffusion facilitator family transporter
L3_060_256G1_scaffold_34_6
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6207..7607)
DNA (1401bp) protein (467aa)
Transcriptional regulator GntR family with aminotransferase domain n=1 Tax=Clostridium sp. CAG:505 RepID=R7APE8_9CLOT
Transcriptional regulator GntR family with aminotransferase domain {ECO:0000313|EMBL:CDD62683.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
transcriptional regulator, GntR family with aminotransferase domain
L3_060_256G1_scaffold_34_7
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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7729..8514
DNA (786bp) protein (262aa)
Putative epimerase n=2 Tax=Firmicutes RepID=R6Q5K0_9FIRM
Putative epimerase {ECO:0000313|EMBL:CDC26051.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
epimerase
L3_060_256G1_scaffold_34_8
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8621..9127)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BB09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62681.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_34_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9469..9927
DNA (459bp) protein (153aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Phosphotyrosine protein phosphatase n=2 Tax=Firmicutes RepID=R6QVV9_9FIRM
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDD62680.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_34_10
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9981..10595)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BBP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62679.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
multimeric flavodoxin WrbA family protein
L3_060_256G1_scaffold_34_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10895..11635)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97965.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
collagen triple helix repeat protein
L3_060_256G1_scaffold_34_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11846..12934)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7APE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62678.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_060_256G1_scaffold_34_13
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12947..13450)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62677.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
acetyltransferase
L3_060_256G1_scaffold_34_14
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(13447..14244)
DNA (798bp) protein (266aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q5L2_9FIRM
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:CDC26066.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_060_256G1_scaffold_34_15
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14263..14598)
DNA (336bp) protein (112aa)
Arsenate reductase and related proteins glutaredoxin family n=1 Tax=Clostridium sp. CAG:505 RepID=R7BB04_9CLOT
Arsenate reductase and related proteins glutaredoxin family {ECO:0000313|EMBL:CDD62675.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Arsenate reductase and related proteins, glutaredoxin family
L3_060_256G1_scaffold_34_16
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14627..15568
DNA (942bp) protein (314aa)
Exodeoxyribonuclease III Xth n=2 Tax=Firmicutes RepID=R7BCU3_9CLOT
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:CDD62674.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
exodeoxyribonuclease III
L3_060_256G1_scaffold_34_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

15610..15882
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26069.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_34_18
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16134..18167)
DNA (2034bp) protein (678aa)
Heat shock protein Hsp90 n=1 Tax=Clostridium sp. CAG:505 RepID=R7APE0_9CLOT
Heat shock protein Hsp90 {ECO:0000313|EMBL:CDD62673.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
molecular chaperone of HSP90 family
L3_060_256G1_scaffold_34_19
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18303..18758)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QVX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62672.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_060_256G1_scaffold_34_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18933..20612
DNA (1680bp) protein (560aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAV7_9CLOT
L3_060_256G1_scaffold_34_21
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

20978..22561
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PRD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26075.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
BCCT transporter
L3_060_256G1_scaffold_34_22
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

22561..22818
DNA (258bp) protein (86aa)
ArgE/DapE family peptidase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q5L9_9FIRM
ArgE/DapE family peptidase {ECO:0000313|EMBL:CDC26076.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_34_23
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

22897..24642
DNA (1746bp) protein (582aa)
homocysteine S-methyltransferase (EC:2.1.1.10)
Homocysteine S-methyltransferase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QVX3_9FIRM
Homocysteine S-methyltransferase {ECO:0000313|EMBL:CDC26077.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
L3_060_256G1_scaffold_34_24
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

24813..26039
DNA (1227bp) protein (409aa)
Efflux transporter RND family MFP subunit n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PNY4_9FIRM
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDC26078.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
RND family efflux transporter MFP subunit
L3_060_256G1_scaffold_34_25
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

26046..26744
DNA (699bp) protein (233aa)
ABC transporter related n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZA7_9FIRM
ABC transporter related {ECO:0000313|EMBL:CDC26079.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
ABC transporter-like protein
L3_060_256G1_scaffold_34_26
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

26738..27946
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PRE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26080.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_060_256G1_scaffold_34_27
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

28079..31564
DNA (3486bp) protein (1162aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
DNA polymerase III subunit alpha (EC:2.7.7.7)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6Q5M2_9FIRM
L3_060_256G1_scaffold_34_28
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31575..31865
DNA (291bp) protein (97aa)
Transcription attenuation protein mtrB n=2 Tax=Firmicutes RepID=R6QVX8_9FIRM
Transcription attenuation protein mtrB {ECO:0000313|EMBL:CDD61248.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
mtrB; transcription attenuation protein MtrB
L3_060_256G1_scaffold_34_29
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

31846..32826
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Firmicutes RepID=R6PNY7_9FIRM
L3_060_256G1_scaffold_34_30
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

32855..34615
DNA (1761bp) protein (587aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Pyruvate kinase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AEN5_9FIRM
pyruvate kinase
Displaying items 1-30 of 158 in total

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